RNA–Protein interactions for RNA: ENST00000522743.1

AP003351.1-201, humanhuman

TSL 3 BASIC

Gene AP003351.1, Length 668 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003351.1-201ENST00000522743 PRDM1O75626 825 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 C6orf222P0C671 652 aaPredicted RBP15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 SLC1A4P43007 532 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 ACLYP53396 1101 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 TKFCQ3LXA3 575 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 SLFN13Q68D06 897 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 IFNL3Q8IZI9 196 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 LRRC47Q8N1G4 583 aaKnown RBP15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 COL11A1P12107 1806 aaPredicted RBP15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 PARP14Q460N5 1801 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 PLIN4Q96Q06 1357 aa15.44■□□□□ 0.06
AP003351.1-201ENST00000522743 ELP1O95163 1332 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 SYNRGQ9UMZ2 1314 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 TRIM43BA6NCK2 446 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 TSPY2A6NKD2 308 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 M0R2C6 588 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 ZEB2O60315 1214 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 SDSP20132 328 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 ACVR2BQ13705 512 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 MCMDC2Q4G0Z9 681 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 TTC22Q5TAA0 569 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 NOL8Q76FK4 1167 aaKnown RBP15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 ANKRD33Q7Z3H0 272 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 NEDD1Q8NHV4 660 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 TRIM43Q96BQ3 446 aaPredicted RBP15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 EPB41L4AQ9HCS5 686 aaPredicted RBP15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 ZNFX1Q9P2E3 1918 aaKnown RBP15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 LTBP2Q14767 1821 aa15.43■□□□□ 0.06
AP003351.1-201ENST00000522743 PLXNA1Q9UIW2 1896 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 DNAJC25-GNG10A0A024R161 153 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 IGKV6D-41A0A0C4DH26 115 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 A0A0U1RQG5 324 aaPredicted RBP15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 ASB14A6NK59 587 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 ADAMTS4O75173 837 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 TAL1P17542 331 aaPredicted RBP15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 CST5P28325 142 aaPredicted RBP15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 TFAP4Q01664 338 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 PPARAQ07869 468 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 KCNA10Q16322 511 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 ARMCX2Q7L311 632 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 GUCD1Q96NT3 240 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 HOMER2Q9NSB8 354 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 PPP4R2Q9NY27 417 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 STX8Q9UNK0 236 aa15.42■□□□□ 0.06
AP003351.1-201ENST00000522743 GREB1LQ9C091 1923 aaPredicted RBP15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 PPIGQ13427 754 aaKnown RBP eCLIP15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 C9orf50Q5SZB4 431 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 CCDC129Q6ZRS4 1044 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 SH3RF1Q7Z6J0 888 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 STAG1Q8WVM7 1258 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 SEZ6LQ9BYH1 1024 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 MTIF3Q9H2K0 278 aaKnown RBP15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 DIAPH3Q9NSV4 1193 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 RIPK3Q9Y572 518 aa15.41■□□□□ 0.06
AP003351.1-201ENST00000522743 CABYRO75952 493 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 FOSL2P15408 326 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 NMIQ13287 307 aaPredicted RBP15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 ALX1Q15699 326 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 GNASQ5JWF2 1037 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 TMEM199Q8N511 208 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 KLHDC9Q8NEP7 349 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 MAFAQ8NHW3 353 aaPredicted RBP15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 LENG1Q96BZ8 264 aaPredicted RBP15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 FAM227BQ96M60 508 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 SEMA6BQ9H3T3 888 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 RNF146Q9NTX7 359 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 PNMA2Q9UL42 364 aa15.4■□□□□ 0.06
AP003351.1-201ENST00000522743 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 PLA2G6O60733 806 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 TIMP1P01033 207 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 ASGR1P07306 291 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 GSPT1P15170 499 aaKnown RBP15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 GJA9P57773 515 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 CCDC96Q2M329 555 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 MPHOSPH6Q99547 160 aaKnown RBP15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 CDX2Q99626 313 aaPredicted RBP15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 AP5M1Q9H0R1 490 aa15.39■□□□□ 0.05
AP003351.1-201ENST00000522743 SMCHD1A6NHR9 2005 aa15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 A0A0D9SFI3 127 aa15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 ALAS1P13196 640 aa15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 TNFAIP2Q03169 654 aa15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 FAAP100Q0VG06 881 aa15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 PSRC1Q6PGN9 363 aaPredicted RBP15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 TRERF1Q96PN7 1200 aa15.38■□□□□ 0.05
AP003351.1-201ENST00000522743 UPF3AQ9H1J1 476 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms