RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 TRIB2Q92519 343 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 MMP19Q99542 508 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 GPCPD1Q9NPB8 672 aa19.03■□□□□ 0.64
TNPO1-212ENST00000520850 RBBP6Q7Z6E9 1792 aaKnown RBP19.03■□□□□ 0.64
TNPO1-212ENST00000520850 ZNFX1Q9P2E3 1918 aaKnown RBP19.02■□□□□ 0.64
TNPO1-212ENST00000520850 DNAJC25-GNG10A0A024R161 153 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 PRC1O43663 620 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 COBLO75128 1261 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 SMARCA1P28370 1054 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 ZNF792Q3KQV3 632 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 DHX32Q7L7V1 743 aaKnown RBP19.02■□□□□ 0.64
TNPO1-212ENST00000520850 RASGRP2Q7LDG7 609 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 SGMS1Q86VZ5 419 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 FBXL16Q8N461 479 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 USP26Q9BXU7 913 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 LY9Q9HBG7 655 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 PAK6Q9NQU5 681 aaPredicted RBP19.02■□□□□ 0.64
TNPO1-212ENST00000520850 ISY1Q9ULR0 285 aaKnown RBP19.02■□□□□ 0.64
TNPO1-212ENST00000520850 MTMR7Q9Y216 660 aa19.02■□□□□ 0.64
TNPO1-212ENST00000520850 FRMPD2Q68DX3 1309 aaPredicted RBP19.01■□□□□ 0.63
TNPO1-212ENST00000520850 CCL5P13501 91 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 SLC16A2P36021 539 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 MTFR1Q15390 333 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 MFSD14CQ5VZR4 134 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 CHST3Q7LGC8 479 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 CATIPQ7Z7H3 387 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 ZNF467Q7Z7K2 595 aaPredicted RBP19.01■□□□□ 0.63
TNPO1-212ENST00000520850 NPLOC4Q8TAT6 608 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 ACAD9Q9H845 621 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 HMX1Q9NP08 348 aaPredicted RBP19.01■□□□□ 0.63
TNPO1-212ENST00000520850 NRBP1Q9UHY1 535 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 MAD2L2Q9UI95 211 aa19.01■□□□□ 0.63
TNPO1-212ENST00000520850 SH2B2O14492 632 aaPredicted RBP19■□□□□ 0.63
TNPO1-212ENST00000520850 DDAH1O94760 285 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 GJA8P48165 433 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 GRM4Q14833 912 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 RGS22Q8NE09 1264 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 MTMR8Q96EF0 704 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 AGBL1Q96MI9 1066 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 TRERF1Q96PN7 1200 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 RNF208Q9H0X6 261 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 BRCA2P51587 3418 aa19■□□□□ 0.63
TNPO1-212ENST00000520850 KLRF2D3W0D1 207 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 CAPN15O75808 1086 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 GOLGA8HP0CJ92 632 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 CALM1P0DP23 149 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 CALM2P0DP24 149 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 CALM3P0DP25 149 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 CCL14Q16627 93 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 MAMDC4Q6UXC1 1216 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 ADGRF4Q8IZF3 695 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 MAML3Q96JK9 1138 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 RIOX1Q9H6W3 641 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 CCPG1Q9ULG6 757 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 PFASO15067 1338 aa18.99■□□□□ 0.63
TNPO1-212ENST00000520850 SGPL1O95470 568 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 PSMA5P28066 241 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
TNPO1-212ENST00000520850 TRAF1Q13077 416 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 ANKRD35Q8N283 1001 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 CHMP4CQ96CF2 233 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 LZTS2Q9BRK4 669 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 CRISPLD2Q9H0B8 497 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 UNC93B1Q9H1C4 597 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 JMJD4Q9H9V9 463 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 RNF146Q9NTX7 359 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 SNX14Q9Y5W7 946 aa18.98■□□□□ 0.63
TNPO1-212ENST00000520850 KIAA0100Q14667 2235 aaKnown RBP18.97■□□□□ 0.63
TNPO1-212ENST00000520850 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 POTEFA5A3E0 1075 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 PRKAR2AP13861 404 aaKnown RBP18.97■□□□□ 0.63
TNPO1-212ENST00000520850 KIF5BP33176 963 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 GNAQP50148 359 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 RCAN1P53805 252 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 SOX10P56693 466 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
TNPO1-212ENST00000520850 CCDC174Q6PII3 467 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 ZNF654Q8IZM8 581 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 STAG2Q8N3U4 1231 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 TINF2Q9BSI4 451 aa18.97■□□□□ 0.63
TNPO1-212ENST00000520850 MSCO60682 206 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 ALAS1P13196 640 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 SAMD3Q8N6K7 520 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 FAM133AQ8N9E0 248 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 U2AF1L4Q8WU68 220 aaKnown RBP18.96■□□□□ 0.63
TNPO1-212ENST00000520850 TM6SF1Q9BZW5 370 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.96■□□□□ 0.632e-7■■■■□ 22.2
TNPO1-212ENST00000520850 A1CFQ9NQ94 594 aaKnown RBP18.96■□□□□ 0.63
TNPO1-212ENST00000520850 SLC12A7Q9Y666 1083 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 SYNGAP1Q96PV0 1343 aa18.96■□□□□ 0.63
TNPO1-212ENST00000520850 PGK2P07205 417 aa18.95■□□□□ 0.62
TNPO1-212ENST00000520850 TRIM32Q13049 653 aa18.95■□□□□ 0.62
TNPO1-212ENST00000520850 COL9A3Q14050 684 aaPredicted RBP18.95■□□□□ 0.62
TNPO1-212ENST00000520850 PPP2R5BQ15173 497 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms