RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 IRX3P78415 501 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 KIF23Q02241 960 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 RESTQ13127 1097 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 GALNT17Q6IS24 598 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 CATSPERGQ6ZRH7 1159 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 BRAPQ7Z569 592 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 FBXO11Q86XK2 927 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 DIS3L2Q8IYB7 885 aaKnown RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 ZNF784Q8NCA9 323 aaPredicted RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 TNPO1Q92973 898 aaKnown RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 GBP4Q96PP9 640 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 C6orf50Q9HD87 102 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 GJB4Q9NTQ9 266 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 ABT1Q9ULW3 272 aaKnown RBP10.3□□□□□ -0.76
CSMD1-208ENST00000520561 KCNJ14Q9UNX9 436 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 AGTPBP1Q9UPW5 1226 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
CSMD1-208ENST00000520561 PARP14Q460N5 1801 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 ESYT2A0FGR8 921 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 ZBED4O75132 1171 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 CETPP11597 493 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 GNA11P29992 359 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 GJA5P36382 358 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-208ENST00000520561 SNAP25P60880 206 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 TREML2Q5T2D2 321 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 SPRYD7Q5W111 196 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 RGMBQ6NW40 437 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 RASAL3Q86YV0 1011 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 BICD2Q8TD16 824 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 COA7Q96BR5 231 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 GLT8D2Q9H1C3 349 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 FOXP1Q9H334 677 aaPredicted RBP10.29□□□□□ -0.76
CSMD1-208ENST00000520561 PNMA3Q9UL41 463 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 ABCB11O95342 1321 aa10.29□□□□□ -0.76
CSMD1-208ENST00000520561 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
CSMD1-208ENST00000520561 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 CCL15-CCL14A0A0B4J2E2 113 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 SMCO2A6NFE2 343 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-208ENST00000520561 ICAM1P05362 532 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 OSBPP22059 807 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 HOXA7P31268 230 aaPredicted RBP10.28□□□□□ -0.76
CSMD1-208ENST00000520561 DSG3P32926 999 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
CSMD1-208ENST00000520561 COG2Q14746 738 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 CCL15Q16663 113 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 USH1GQ495M9 461 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 SAPCD2Q86UD0 394 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 BLIDQ8IZY5 108 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 CUL5Q93034 780 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 SHISA4Q96DD7 197 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 ATG4CQ96DT6 458 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 HOXC10Q9NYD6 342 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 CCPG1Q9ULG6 757 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 PCDHA4Q9UN74 947 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 PCDHA1Q9Y5I3 950 aa10.28□□□□□ -0.76
CSMD1-208ENST00000520561 MYH15Q9Y2K3 1946 aa10.27□□□□□ -0.76
CSMD1-208ENST00000520561 RBBP6Q7Z6E9 1792 aaKnown RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 BTBD18B2RXH4 712 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 KIF28PB7ZC32 967 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 GOLGA6L22H0YM25 854 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 VWA5AO00534 786 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 SLC10A3P09131 477 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 NCLP19338 710 aaKnown RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 MRPL12P52815 198 aaKnown RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 OAZ1P54368 228 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 KRT85P78386 507 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 NOSTRINQ8IVI9 506 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 REXO1Q8N1G1 1221 aaKnown RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 MB21D1Q8N884 522 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 GTF3C2Q8WUA4 911 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 ZNF396Q96N95 335 aaPredicted RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 ZMYND12Q9H0C1 365 aa10.27□□□□□ -0.77
CSMD1-208ENST00000520561 NOL7Q9UMY1 257 aaKnown RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 MRPL11Q9Y3B7 192 aaKnown RBP10.27□□□□□ -0.77
CSMD1-208ENST00000520561 CCDC194A0A1B0GVG4 234 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 MANSC4A6NHS7 340 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 BAG4O95429 457 aaKnown RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 U2AF2P26368 475 aaKnown RBP eCLIP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 NR5A1Q13285 461 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 MOGSQ13724 837 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 CSPP1Q1MSJ5 1256 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 FOXD4L6Q3SYB3 417 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 ATL3Q6DD88 541 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 FOXD4L3Q6VB84 417 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-208ENST00000520561 KRT25Q7Z3Z0 450 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 ANKRD23Q86SG2 305 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 TEX2Q8IWB9 1127 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 CPXCR1Q8N123 301 aa10.26□□□□□ -0.77
CSMD1-208ENST00000520561 BRI3BPQ8WY22 251 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms