RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	CCDC144B	Q3MJ40	725 aa		11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	CCDC84	Q86UT8	332 aa	Predicted RBP	11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	TMX1	Q9H3N1	280 aa		11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	TMOD2	Q9NZR1	351 aa		11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	ZNF70	Q9UC06	446 aa	Predicted RBP	11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	PYCARD	Q9ULZ3	195 aa		11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	PCDHA4	Q9UN74	947 aa		11.96	□□□□□ -0.5
CDK18-222	ENST00000515494	STXBP3	O00186	592 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	RIOK3	O14730	519 aa	Known RBP	11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	CAPN2	P17655	700 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	SLC16A2	P36021	539 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	JAG1	P78504	1218 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	SEPT2	Q15019	361 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	IL17A	Q16552	155 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	CNPY4	Q8N129	248 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	GML	Q99445	158 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	TUBE1	Q9UJT0	475 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	PDHB	P11177	359 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	NAPA	P54920	295 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	MDM2	Q00987	491 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	CERKL	Q49MI3	558 aa	Predicted RBP	11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	PRAMEF18	Q5VWM3	479 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	CD2AP	Q9Y5K6	639 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	ATP1A3	P13637	1013 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	RRP1B	Q14684	758 aa	Known RBP	11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	POSTN	Q15063	836 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	PTPN21	Q16825	1174 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	SOGA3	Q5TF21	947 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	TTBK2	Q6IQ55	1244 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	BARHL2	Q9NY43	387 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	PI4KB	Q9UBF8	816 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	PCDHA6	Q9UN73	950 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	PCDHA8	Q9Y5H6	950 aa		11.95	□□□□□ -0.5
CDK18-222	ENST00000515494	CCDC194	A0A1B0GVG4	234 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	ACTN4	O43707	911 aa	Known RBP	11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	CALML3	P27482	149 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	KCTD1	Q719H9	257 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	FILIP1	Q7Z7B0	1213 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	COA7	Q96BR5	231 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	SPON1	Q9HCB6	807 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	SLFN14	P0C7P3	912 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	SLC20A2	Q08357	652 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	NCAPH	Q15003	741 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	CCDC96	Q2M329	555 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	GMPS	P49915	693 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	FKBP1A	P62942	108 aa	Known RBP	11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	ATP2C1	P98194	919 aa	Predicted RBP	11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	HDLBP	Q00341	1268 aa	Known RBP	11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	ZNF579	Q8NAF0	562 aa	Known RBP	11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	IDI2	Q9BXS1	227 aa		11.94	□□□□□ -0.5
CDK18-222	ENST00000515494	WNT10B	O00744	389 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	GH2	P01242	217 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	RRP36	Q96EU6	259 aa	Known RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	NUP88	Q99567	741 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	TMEM60	Q9H2L4	133 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	RNF216	Q9NWF9	866 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	FZD1	Q9UP38	647 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	SMCO2	A6NFE2	343 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	PP2D1	A8MPX8	630 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	SNAP25	P60880	206 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	ZYX	Q15942	572 aa	Known RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	SPICE1	Q8N0Z3	855 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	SPZ1	Q9BXG8	430 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	BIN2	Q9UBW5	565 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	MAN1B1	Q9UKM7	699 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	SMC2	O95347	1197 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	JAKMIP3	Q5VZ66	844 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	MICALL2	Q8IY33	904 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	TRMT44	Q8IYL2	757 aa	Known RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	PLIN2	Q99541	437 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	MYOZ2	Q9NPC6	264 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	IFNK	Q9P0W0	207 aa		11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	SEC63	Q9UGP8	760 aa	Known RBP	11.93	□□□□□ -0.5
CDK18-222	ENST00000515494	GOLGA6L6	A8MZA4	724 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494		M0R2N6	131 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	TTLL1	O95922	423 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	EEF2	P13639	858 aa	Known RBP	11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	TSPYL1	Q9H0U9	437 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	TMEM260	Q9NX78	707 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	ZNF541	Q9H0D2	1346 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	LOC102724159	A0A0B4J2E5	919 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	PWP2	Q15269	919 aa	Known RBP	11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	GRIPAP1	Q4V328	841 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	FERMT2	Q96AC1	680 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	MRI	Q9BWK5	157 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	HSD3B7	Q9H2F3	369 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	SH3GLB2	Q9NR46	395 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	IGKV6D-41	A0A0C4DH26	115 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	LETM2	Q2VYF4	491 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	SARM1	Q6SZW1	724 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	ILDR2	Q71H61	639 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	CCDC148	Q8NFR7	591 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	CACTIN	Q8WUQ7	758 aa	Known RBP	11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	SMARCE1	Q969G3	411 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	XPO4	Q9C0E2	1151 aa	Known RBP	11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	BLZF1	Q9H2G9	400 aa		11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	DHX36	Q9H2U1	1008 aa	Known RBP	11.92	□□□□□ -0.5
CDK18-222	ENST00000515494	SWAP70	Q9UH65	585 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms