RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	DDX20	Q9UHI6	824 aa	Known RBP	18.48	■□□□□ 0.55
SEC31A-238	ENST00000514326	DNAJC25-GNG10	A0A024R161	153 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	GOLGA8H	P0CJ92	632 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	ALAS1	P13196	640 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	NT5C2	P49902	561 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	CCDC178	Q5BJE1	867 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	BMP2KL	Q5H9B9	411 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	ANO1	Q5XXA6	986 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	NECAB2	Q7Z6G3	386 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	ANKRD35	Q8N283	1001 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	PNMA1	Q8ND90	353 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	ANKS1A	Q92625	1134 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	MAP4K1	Q92918	833 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	TINF2	Q9BSI4	451 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	HTATIP2	Q9BUP3	242 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	KAT14	Q9H8E8	782 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	RNF146	Q9NTX7	359 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	FBXO40	Q9UH90	709 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	DIS3	Q9Y2L1	958 aa	Known RBP	18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	TNKS	O95271	1327 aa		18.47	■□□□□ 0.55
SEC31A-238	ENST00000514326	STOX1	Q6ZVD7	989 aa		18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	TRERF1	Q96PN7	1200 aa		18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	ESYT1	Q9BSJ8	1104 aa		18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	UBAC1	Q9BSL1	405 aa		18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	RANBP17	Q9H2T7	1088 aa	Known RBP	18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	CPVL	Q9H3G5	476 aa		18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326	RBM8A	Q9Y5S9	174 aa	Known RBP	18.46	■□□□□ 0.55
SEC31A-238	ENST00000514326		E7EWF7	191 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	CNTN2	Q02246	1040 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	MUM1L1	Q5H9M0	696 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	FGD4	Q96M96	766 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	UBA5	Q9GZZ9	404 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	LSG1	Q9H089	658 aa	Known RBP	18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	ACAD9	Q9H845	621 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326	CCPG1	Q9ULG6	757 aa		18.45	■□□□□ 0.54
SEC31A-238	ENST00000514326		H0YGN5	161 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	SEPT4	O43236	478 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	ICAM1	P05362	532 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	NEFL	P07196	543 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	TRDN	Q13061	729 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	SEC23A	Q15436	765 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	TKFC	Q3LXA3	575 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	KIAA1211	Q6ZU35	1233 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	C11orf49	Q9H6J7	331 aa		18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	A1CF	Q9NQ94	594 aa	Known RBP	18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.44	■□□□□ 0.54
SEC31A-238	ENST00000514326	MSC	O60682	206 aa		18.43	■□□□□ 0.54
SEC31A-238	ENST00000514326	GPATCH4	Q5T3I0	446 aa	Known RBP	18.43	■□□□□ 0.54
SEC31A-238	ENST00000514326	IFIT1B	Q5T764	474 aa	Known RBP	18.43	■□□□□ 0.54
SEC31A-238	ENST00000514326	CHST3	Q7LGC8	479 aa		18.43	■□□□□ 0.54
SEC31A-238	ENST00000514326	PFAS	O15067	1338 aa		18.43	■□□□□ 0.54
SEC31A-238	ENST00000514326	POTEB2	H3BUK9	544 aa		18.42	■□□□□ 0.54
SEC31A-238	ENST00000514326	SNAI1	O95863	264 aa	Predicted RBP	18.42	■□□□□ 0.54
SEC31A-238	ENST00000514326	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.42	■□□□□ 0.54
SEC31A-238	ENST00000514326	RALYL	Q86SE5	291 aa	Known RBP	18.42	■□□□□ 0.54
SEC31A-238	ENST00000514326	FAM133A	Q8N9E0	248 aa		18.42	■□□□□ 0.54
SEC31A-238	ENST00000514326	SOWAHB	A6NEL2	793 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	IFIT3	O14879	490 aa	Known RBP	18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	EVI5	O60447	810 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	COL6A1	P12109	1028 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	GJC2	Q5T442	439 aa	Predicted RBP	18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	MAMDC4	Q6UXC1	1216 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	NSMF	Q6X4W1	530 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	NCOA7	Q8NI08	942 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	PURB	Q96QR8	312 aa	Known RBP	18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	SENP2	Q9HC62	589 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	ANO2	Q9NQ90	1003 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	CYP39A1	Q9NYL5	469 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	NRBP1	Q9UHY1	535 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	CNPY2	Q9Y2B0	182 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	SYNGAP1	Q96PV0	1343 aa		18.41	■□□□□ 0.54
SEC31A-238	ENST00000514326	NFIB	O00712	420 aa		18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	SLC27A2	O14975	620 aa		18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	MYCN	P04198	464 aa	Predicted RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	ANTXR2	P58335	489 aa		18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	COL9A3	Q14050	684 aa	Predicted RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	ASPRV1	Q53RT3	343 aa		18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	STAG2	Q8N3U4	1231 aa		18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	MSL3	Q8N5Y2	521 aa	Known RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	LENG1	Q96BZ8	264 aa	Predicted RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	DDX49	Q9Y6V7	483 aa	Known RBP	18.4	■□□□□ 0.54
SEC31A-238	ENST00000514326	PLXNA1	Q9UIW2	1896 aa		18.39	■□□□□ 0.54
SEC31A-238	ENST00000514326	PARP1	P09874	1014 aa	Known RBP	18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	CREB3L3	Q68CJ9	461 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	ARMCX2	Q7L311	632 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	CCDC144CP	Q8IYA2	1237 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	ADGRF4	Q8IZF3	695 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	CLEC4D	Q8WXI8	215 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	VAT1L	Q9HCJ6	419 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	NR2E3	Q9Y5X4	410 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	ASTN1	O14525	1302 aa		18.39	■□□□□ 0.53
SEC31A-238	ENST00000514326	DNM1L	O00429	736 aa		18.38	■□□□□ 0.53
SEC31A-238	ENST00000514326	CDC45	O75419	566 aa		18.38	■□□□□ 0.53
SEC31A-238	ENST00000514326	ACVR2B	Q13705	512 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms