RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 NCOA7Q8NI08 942 aa20.81■□□□□ 0.92
DDR1-272ENST00000513243 RANBP17Q9H2T7 1088 aaKnown RBP20.81■□□□□ 0.92
DDR1-272ENST00000513243 ANO2Q9NQ90 1003 aa20.81■□□□□ 0.92
DDR1-272ENST00000513243 HOMER2Q9NSB8 354 aa20.81■□□□□ 0.92
DDR1-272ENST00000513243 DIS3Q9Y2L1 958 aaKnown RBP20.81■□□□□ 0.92
DDR1-272ENST00000513243 ZNFX1Q9P2E3 1918 aaKnown RBP20.8■□□□□ 0.92
DDR1-272ENST00000513243 DNAJC25-GNG10A0A024R161 153 aa20.8■□□□□ 0.92
DDR1-272ENST00000513243 GOLGA8HP0CJ92 632 aa20.8■□□□□ 0.92
DDR1-272ENST00000513243 CAPN2P17655 700 aa20.8■□□□□ 0.92
DDR1-272ENST00000513243 RALYLQ86SE5 291 aaKnown RBP20.8■□□□□ 0.92
DDR1-272ENST00000513243 TRPV1Q8NER1 839 aa20.8■□□□□ 0.92
DDR1-272ENST00000513243 DDX11Q96FC9 970 aa20.8■□□□□ 0.92
DDR1-272ENST00000513243 FBXO40Q9UH90 709 aa20.8■□□□□ 0.92
DDR1-272ENST00000513243 MKI67P46013 3256 aaKnown RBP20.8■□□□□ 0.92
DDR1-272ENST00000513243 FARP2O94887 1054 aaPredicted RBP20.79■□□□□ 0.92
DDR1-272ENST00000513243 CYBAP13498 195 aa20.79■□□□□ 0.92
DDR1-272ENST00000513243 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
DDR1-272ENST00000513243 GPATCH4Q5T3I0 446 aaKnown RBP20.79■□□□□ 0.92
DDR1-272ENST00000513243 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
DDR1-272ENST00000513243 LHX8Q68G74 356 aa20.79■□□□□ 0.92
DDR1-272ENST00000513243 RNF146Q9NTX7 359 aa20.79■□□□□ 0.92
DDR1-272ENST00000513243 OGDHLQ9ULD0 1010 aa20.79■□□□□ 0.92
DDR1-272ENST00000513243 SLC27A2O14975 620 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 ICAM1P05362 532 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 ALAS1P13196 640 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 TAL1P17542 331 aaPredicted RBP20.78■□□□□ 0.92
DDR1-272ENST00000513243 TKFCQ3LXA3 575 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 PRAMEF19Q5SWL8 479 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 CASC1Q6TDU7 716 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 CHST3Q7LGC8 479 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 ANKRD35Q8N283 1001 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 TRERF1Q96PN7 1200 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 CPVLQ9H3G5 476 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 ACAD9Q9H845 621 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 CCPG1Q9ULG6 757 aa20.78■□□□□ 0.92
DDR1-272ENST00000513243 IFIT3O14879 490 aaKnown RBP20.77■□□□□ 0.92
DDR1-272ENST00000513243 CNGA1P29973 690 aa20.77■□□□□ 0.92
DDR1-272ENST00000513243 ANTXR2P58335 489 aa20.77■□□□□ 0.92
DDR1-272ENST00000513243 CREB3L3Q68CJ9 461 aa20.77■□□□□ 0.92
DDR1-272ENST00000513243 MB21D2Q8IYB1 491 aaPredicted RBP20.77■□□□□ 0.92
DDR1-272ENST00000513243 TINF2Q9BSI4 451 aa20.77■□□□□ 0.92
DDR1-272ENST00000513243 UBA5Q9GZZ9 404 aa20.77■□□□□ 0.92
DDR1-272ENST00000513243 SENP2Q9HC62 589 aa20.77■□□□□ 0.92
DDR1-272ENST00000513243 MNX1P50219 401 aaPredicted RBP20.76■□□□□ 0.91
DDR1-272ENST00000513243 ASPRV1Q53RT3 343 aa20.76■□□□□ 0.91
DDR1-272ENST00000513243 MUM1L1Q5H9M0 696 aa20.76■□□□□ 0.91
DDR1-272ENST00000513243 ANKLE1Q8NAG6 615 aa20.76■□□□□ 0.91
DDR1-272ENST00000513243 A1CFQ9NQ94 594 aaKnown RBP20.76■□□□□ 0.91
DDR1-272ENST00000513243 DDX20Q9UHI6 824 aaKnown RBP20.76■□□□□ 0.91
DDR1-272ENST00000513243 PDE4DIPQ5VU43 2346 aa20.75■□□□□ 0.91
DDR1-272ENST00000513243 PARP1P09874 1014 aaKnown RBP20.75■□□□□ 0.91
DDR1-272ENST00000513243 IGDCC4Q8TDY8 1250 aa20.75■□□□□ 0.91
DDR1-272ENST00000513243 DIS3LQ8TF46 1054 aaKnown RBP20.75■□□□□ 0.91
DDR1-272ENST00000513243 PAWRQ96IZ0 340 aaKnown RBP20.75■□□□□ 0.91
DDR1-272ENST00000513243 FGD4Q96M96 766 aa20.75■□□□□ 0.91
DDR1-272ENST00000513243 ERICH2A1L162 156 aa20.74■□□□□ 0.91
DDR1-272ENST00000513243 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
DDR1-272ENST00000513243 TMEM67Q5HYA8 995 aa20.74■□□□□ 0.91
DDR1-272ENST00000513243 MAMDC4Q6UXC1 1216 aa20.74■□□□□ 0.91
DDR1-272ENST00000513243 ZNF467Q7Z7K2 595 aaPredicted RBP20.74■□□□□ 0.91
DDR1-272ENST00000513243 NRBP1Q9UHY1 535 aa20.74■□□□□ 0.91
DDR1-272ENST00000513243 PLXNA1Q9UIW2 1896 aa20.74■□□□□ 0.91
DDR1-272ENST00000513243 SEPT4O43236 478 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 MSCO60682 206 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 CNTN2Q02246 1040 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 WTAPQ15007 396 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 SART3Q15020 963 aaKnown RBP20.73■□□□□ 0.91
DDR1-272ENST00000513243 ADGRF4Q8IZF3 695 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 STAG2Q8N3U4 1231 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 MSL3Q8N5Y2 521 aaKnown RBP20.73■□□□□ 0.91
DDR1-272ENST00000513243 FAM133AQ8N9E0 248 aa20.73■□□□□ 0.91
DDR1-272ENST00000513243 SMCHD1A6NHR9 2005 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 POTEB2H3BUK9 544 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 SNAI1O95863 264 aaPredicted RBP20.72■□□□□ 0.91
DDR1-272ENST00000513243 ANO1Q5XXA6 986 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 NECAB2Q7Z6G3 386 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 GPHNQ9NQX3 736 aaPredicted RBP20.72■□□□□ 0.91
DDR1-272ENST00000513243 CYP39A1Q9NYL5 469 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 PNMA2Q9UL42 364 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 PFASO15067 1338 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 WDR19Q8NEZ3 1342 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 SYNGAP1Q96PV0 1343 aa20.72■□□□□ 0.91
DDR1-272ENST00000513243 PALM3A6NDB9 673 aaPredicted RBP20.71■□□□□ 0.91
DDR1-272ENST00000513243 NFIBO00712 420 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 PRC1O43663 620 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 ZNF865P0CJ78 1059 aaPredicted RBP20.71■□□□□ 0.91
DDR1-272ENST00000513243 MCM5P33992 734 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 CDC37Q16543 378 aaPredicted RBP20.71■□□□□ 0.91
DDR1-272ENST00000513243 RNF20Q5VTR2 975 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 NSMFQ6X4W1 530 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 CLEC4DQ8WXI8 215 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 JMJD4Q9H9V9 463 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 VAT1LQ9HCJ6 419 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 CNPY2Q9Y2B0 182 aa20.71■□□□□ 0.91
DDR1-272ENST00000513243 SOWAHBA6NEL2 793 aa20.7■□□□□ 0.9
DDR1-272ENST00000513243 KLRF2D3W0D1 207 aa20.7■□□□□ 0.9
DDR1-272ENST00000513243 TROAPQ12815 778 aa20.7■□□□□ 0.9
DDR1-272ENST00000513243 GRM4Q14833 912 aa20.7■□□□□ 0.9
DDR1-272ENST00000513243 RASEFQ8IZ41 740 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms