RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 FBXO40Q9UH90 709 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 SYNPO2Q9UMS6 1093 aa17.28■□□□□ 0.36
LETM1-207ENST00000512669 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
LETM1-207ENST00000512669 A0A0D9SFI3 127 aa17.27■□□□□ 0.36
LETM1-207ENST00000512669 TIMP1P01033 207 aa17.27■□□□□ 0.36
LETM1-207ENST00000512669 DNAJB2P25686 324 aa17.27■□□□□ 0.36
LETM1-207ENST00000512669 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
LETM1-207ENST00000512669 PPARAQ07869 468 aa17.27■□□□□ 0.36
LETM1-207ENST00000512669 FAAP100Q0VG06 881 aa17.27■□□□□ 0.36
LETM1-207ENST00000512669 PPIGQ13427 754 aaKnown RBP eCLIP17.27■□□□□ 0.365e-14■■□□□ 11.6
LETM1-207ENST00000512669 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.36
LETM1-207ENST00000512669 ZHX1Q9UKY1 873 aaPredicted RBP17.27■□□□□ 0.36
LETM1-207ENST00000512669 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 ZBED4O75132 1171 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 EPHB4P54760 987 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 NAPBQ9H115 298 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 ABHD16BQ9H3Z7 469 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 HELLSQ9NRZ9 838 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
LETM1-207ENST00000512669 EYSQ5T1H1 3165 aa17.26■□□□□ 0.35
LETM1-207ENST00000512669 SPTBN5Q9NRC6 3674 aaKnown RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 F5H6K3 240 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 SNAI1O95863 264 aaPredicted RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 OAZ1P54368 228 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 CTDSPL2Q05D32 466 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 KLRC3Q07444 240 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 KCNA10Q16322 511 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 CCSAPQ6IQ19 270 aaPredicted RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 ZNF589Q86UQ0 364 aaPredicted RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 ZNF444Q8N0Y2 327 aaPredicted RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 CHST13Q8NET6 341 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
LETM1-207ENST00000512669 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 CLIP2Q9UDT6 1046 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 TBX21Q9UL17 535 aa17.25■□□□□ 0.35
LETM1-207ENST00000512669 A0A0U1RQG5 324 aaPredicted RBP17.24■□□□□ 0.35
LETM1-207ENST00000512669 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
LETM1-207ENST00000512669 NDUFB10O96000 172 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 FDX1P10109 184 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 PDE4AP27815 886 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
LETM1-207ENST00000512669 ACVR2BQ13705 512 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 ALX1Q15699 326 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
LETM1-207ENST00000512669 ANKRD35Q8N283 1001 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 TMEM199Q8N511 208 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 NEDD1Q8NHV4 660 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 MKL1Q969V6 931 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 TIFAQ96CG3 184 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 UPF3AQ9H1J1 476 aaKnown RBP17.24■□□□□ 0.35
LETM1-207ENST00000512669 PRDM6Q9NQX0 595 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.24■□□□□ 0.35
LETM1-207ENST00000512669 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
LETM1-207ENST00000512669 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 C6orf222P0C671 652 aaPredicted RBP17.23■□□□□ 0.35
LETM1-207ENST00000512669 GJA9P57773 515 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 TFAP4Q01664 338 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 TJAP1Q5JTD0 557 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 RILPL2Q969X0 211 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 ZNF576Q9H609 170 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 SLC38A10Q9HBR0 1119 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 MYH4Q9Y623 1939 aa17.23■□□□□ 0.35
LETM1-207ENST00000512669 FGAP02671 866 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 ASGR1P07306 291 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 SDSP20132 328 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 CDK7P50613 346 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 GRIN2CQ14957 1233 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 GMCL1P1Q8NEA9 526 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 GAS2L1Q99501 681 aaPredicted RBP17.22■□□□□ 0.35
LETM1-207ENST00000512669 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.22■□□□□ 0.35
LETM1-207ENST00000512669 SEZ6LQ9BYH1 1024 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 MTIF3Q9H2K0 278 aaKnown RBP17.22■□□□□ 0.35
LETM1-207ENST00000512669 IL17RBQ9NRM6 502 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 RIPK3Q9Y572 518 aa17.22■□□□□ 0.35
LETM1-207ENST00000512669 ARVCFO00192 962 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 TTLL1O95922 423 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 FGRP09769 529 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
LETM1-207ENST00000512669 NKX3-2P78367 333 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 PDE4BQ07343 736 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 CCDC144BQ3MJ40 725 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 PPP4R3BQ5MIZ7 849 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 ARMCX2Q7L311 632 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 LRRC47Q8N1G4 583 aaKnown RBP17.21■□□□□ 0.35
LETM1-207ENST00000512669 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 VTI1AQ96AJ9 217 aa17.21■□□□□ 0.35
LETM1-207ENST00000512669 PRUNE2Q8WUY3 3088 aa17.2■□□□□ 0.34
LETM1-207ENST00000512669 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
LETM1-207ENST00000512669 NMT2O60551 498 aa17.2■□□□□ 0.34
LETM1-207ENST00000512669 CABYRO75952 493 aa17.2■□□□□ 0.34
LETM1-207ENST00000512669 TSPY3P0CV98 308 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms