RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TPM4P67936 248 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 CUL4BQ13620 913 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 ZYXQ15942 572 aaKnown RBP16.89■□□□□ 0.29
PHF3-209ENST00000509330 ABCB5Q2M3G0 1257 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 RSBN1LQ6PCB5 846 aaPredicted RBP16.89■□□□□ 0.29
PHF3-209ENST00000509330 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.29
PHF3-209ENST00000509330 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
PHF3-209ENST00000509330 FOCADQ5VW36 1801 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 MYH8P13535 1937 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 COL4A5P29400 1685 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 FANCCQ00597 558 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
PHF3-209ENST00000509330 CCDC84Q86UT8 332 aaPredicted RBP16.89■□□□□ 0.29
PHF3-209ENST00000509330 TECP42680 631 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 GOLGA8FQ08AF8 430 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 GOLGA8DPQ0D2H9 430 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 CREBRFQ8IUR6 639 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 MRFAP1L1Q96HT8 127 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 MTRQ99707 1265 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 QSER1Q2KHR3 1735 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 TDP2O95551 362 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 SNHG28P0DPA3 235 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 ADCY7P51828 1080 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
PHF3-209ENST00000509330 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
PHF3-209ENST00000509330 STAT6P42226 847 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 TXKP42681 527 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USH1GQ495M9 461 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 NEK8Q86SG6 692 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 SIAH1Q8IUQ4 282 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 IQUBQ8NA54 791 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 BPIFA3Q9BQP9 254 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 EHD4Q9H223 541 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 NEMFO60524 1076 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 MORC3Q14149 939 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.87■□□□□ 0.29
PHF3-209ENST00000509330 RTKN2Q8IZC4 609 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.87■□□□□ 0.29
PHF3-209ENST00000509330 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
PHF3-209ENST00000509330 TMOD2Q9NZR1 351 aa16.87■□□□□ 0.29
PHF3-209ENST00000509330 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 OFD1O75665 1012 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 UBA7P41226 1012 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 ECE1P42892 770 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 SARSP49591 514 aaKnown RBP16.86■□□□□ 0.29
PHF3-209ENST00000509330 HDLBPQ00341 1268 aaKnown RBP16.86■□□□□ 0.29
PHF3-209ENST00000509330 KRT25Q7Z3Z0 450 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 MED15Q96RN5 788 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 CDK11BP21127 795 aaKnown RBP16.86■□□□□ 0.29
PHF3-209ENST00000509330 TXLNAP40222 546 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 UBASH3AP57075 661 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 E2F4Q16254 413 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 KANK3Q6NY19 840 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 KIAA1524Q8TCG1 905 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 CCDC17Q96LX7 622 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 KANSL2Q9H9L4 492 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 F5H6K3 240 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 SLC37A4O43826 429 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 KLRC3Q07444 240 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 LRRC15Q8TF66 581 aa16.86■□□□□ 0.29
PHF3-209ENST00000509330 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 A0A1W2PRG0 241 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 FKBP1AP62942 108 aaKnown RBP16.85■□□□□ 0.29
PHF3-209ENST00000509330 DPYDQ12882 1025 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 QRICH1Q2TAL8 776 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 NBPF9Q3BBW0 867 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 GALNT17Q6IS24 598 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 ZNF70Q9UC06 446 aaPredicted RBP16.85■□□□□ 0.29
PHF3-209ENST00000509330 OR52Z1P0C646 297 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 PDXDC2PQ6P474 469 aa16.85■□□□□ 0.29
PHF3-209ENST00000509330 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.85■□□□□ 0.29
PHF3-209ENST00000509330 IKBKBO14920 756 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 ZBTB5O15062 677 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 NDUFB10O96000 172 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 LONP1P36776 959 aaKnown RBP16.84■□□□□ 0.29
PHF3-209ENST00000509330 R3HDM1Q15032 1099 aaKnown RBP16.84■□□□□ 0.29
PHF3-209ENST00000509330 RRAGBQ5VZM2 374 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 LRRC8AQ8IWT6 810 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
PHF3-209ENST00000509330 DISC1Q9NRI5 854 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms