RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 KCNB2Q92953 911 aa17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 TMEM87BQ96K49 555 aa17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 APBA2Q99767 749 aa17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 USP26Q9BXU7 913 aa17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 LY9Q9HBG7 655 aa17.14■□□□□ 0.33
SH3TC1-216ENST00000508641 ZNFX1Q9P2E3 1918 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 SH2B2O14492 632 aaPredicted RBP17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 HMGCRP04035 888 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 CCL5P13501 91 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 CPA1P15085 419 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 TAL1P17542 331 aaPredicted RBP17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 ABRAQ8N0Z2 381 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 NUP133Q8WUM0 1156 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 MTA3Q9BTC8 594 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 UNC93B1Q9H1C4 597 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 FLRT1Q9NZU1 646 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 KIAA0100Q14667 2235 aaKnown RBP17.13■□□□□ 0.33
SH3TC1-216ENST00000508641 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 ICAM1P05362 532 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 HOXC6P09630 235 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 TROAPQ12815 778 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 GRM4Q14833 912 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 TRMT44Q8IYL2 757 aaKnown RBP17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 CHST13Q8NET6 341 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 JAKMIP1Q96N16 626 aaKnown RBP17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 TRERF1Q96PN7 1200 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 MYL10Q9BUA6 226 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 RNF208Q9H0X6 261 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
SH3TC1-216ENST00000508641 SMCHD1A6NHR9 2005 aa17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 POTEFA5A3E0 1075 aa17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 TKFCQ3LXA3 575 aa17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 ZNF654Q8IZM8 581 aa17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
SH3TC1-216ENST00000508641 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 LIFRP42702 1097 aa17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 CDC37Q16543 378 aaPredicted RBP17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 MFSD14CQ5VZR4 134 aa17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 RAB11FIP4Q86YS3 637 aa17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
SH3TC1-216ENST00000508641 EN2P19622 333 aaPredicted RBP17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 RXRAP19793 462 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 CYP2C19P33261 490 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 FGD1P98174 961 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 USH1GQ495M9 461 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 CCDC144CPQ8IYA2 1237 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 ZNF236Q9UL36 1845 aa17.09■□□□□ 0.33
SH3TC1-216ENST00000508641 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.33
SH3TC1-216ENST00000508641 DDAH1O94760 285 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 PSMA5P28066 241 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 ZNF792Q3KQV3 632 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 NSMFQ6X4W1 530 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 CTCFLQ8NI51 663 aaPredicted RBP17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 MAML3Q96JK9 1138 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 DEFB118Q96PH6 123 aa17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 HMX1Q9NP08 348 aaPredicted RBP17.08■□□□□ 0.32
SH3TC1-216ENST00000508641 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 SEC24BO95487 1268 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 GJB1P08034 283 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 QRICH1Q2TAL8 776 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 OLFML2BQ68BL8 750 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 Q6ZUG5 572 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 PIBF1Q8WXW3 757 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 A1CFQ9NQ94 594 aaKnown RBP17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 PLXNA1Q9UIW2 1896 aa17.07■□□□□ 0.32
SH3TC1-216ENST00000508641 DNAJC25-GNG10A0A024R161 153 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 NFIBO00712 420 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 CALM1P0DP23 149 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 CALM2P0DP24 149 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 CALM3P0DP25 149 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms