RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 MROH7Q68CQ1 1323 aa11.04□□□□□ -0.64
UBE2D3-223ENST00000508249 ATG2AQ2TAZ0 1938 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 ARVCFO00192 962 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 FLOT1O75955 427 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 ASGR1P07306 291 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 PDE6AP16499 860 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 MX1P20591 662 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 NKX3-2P78367 333 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SLC9C2Q5TAH2 1124 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 ANKRD45Q5TZF3 282 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 MAMDC4Q6UXC1 1216 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SPICE1Q8N0Z3 855 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 TMEM199Q8N511 208 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 IL27Q8NEV9 243 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 NUP133Q8WUM0 1156 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SNX27Q96L92 541 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 ANTXR1Q9H6X2 564 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SLC28A3Q9HAS3 691 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 MSRAQ9UJ68 235 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
UBE2D3-223ENST00000508249 SIP14410 1827 aa11.02□□□□□ -0.64
UBE2D3-223ENST00000508249 MYH7P12883 1935 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 MYH4Q9Y623 1939 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 A0A0U1RQG5 324 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 DUSP11O75319 330 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 SLC25A27O95847 323 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 PTGS1P23219 599 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 ADD2P35612 726 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 USP5P45974 858 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 GJA9P57773 515 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 OTOP2Q7RTS6 562 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 KBTBD3Q8NAB2 608 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 VCPKMTQ9H867 229 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 CABP5Q9NP86 173 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 DMDP11532 3685 aa11.02□□□□□ -0.65
UBE2D3-223ENST00000508249 DCHS1Q96JQ0 3298 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 PI4K2BG5E9Z4 385 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 WDR46O15213 610 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 LPXNO60711 386 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 CYP2D6P10635 497 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 AAK1Q2M2I8 961 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 CCDC174Q6PII3 467 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 TTC6Q86TZ1 520 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 GLT1D1Q96MS3 346 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 ZNF532Q9HCE3 1301 aa11.01□□□□□ -0.65
UBE2D3-223ENST00000508249 SCN10AQ9Y5Y9 1956 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 TCRBV5S4A2TA0A5A2 114 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 VWA5AO00534 786 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 CA3P07451 260 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 C6orf222P0C671 652 aaPredicted RBP11□□□□□ -0.65
UBE2D3-223ENST00000508249 AKR1B1P15121 316 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 MRE11P49959 708 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 NUCB1Q02818 461 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 KCTD2Q14681 263 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 TMEM179Q6ZVK1 233 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
UBE2D3-223ENST00000508249 MSL3Q8N5Y2 521 aaKnown RBP11□□□□□ -0.65
UBE2D3-223ENST00000508249 PI4K2BQ8TCG2 481 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 AGBL1Q96MI9 1066 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 BCL11AQ9H165 835 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 FAM184BQ9ULE4 1060 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 CNPY2Q9Y2B0 182 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 RIPK3Q9Y572 518 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 SALL3Q9BXA9 1300 aa11□□□□□ -0.65
UBE2D3-223ENST00000508249 B4GALT4O60513 344 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 FGBP02675 491 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 CCL23P55773 120 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 TTLL4Q14679 1199 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 CCDC144BQ3MJ40 725 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 CHD1LQ86WJ1 897 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 APPBP2Q92624 585 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 DYNLL2Q96FJ2 89 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 ATP8A2Q9NTI2 1148 aa10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 ZHX1Q9UKY1 873 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-223ENST00000508249 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 RBAK-RBAKDNI3L0D1 243 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 MPHOSPH10O00566 681 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 GNAT2P19087 354 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 STAT3P40763 770 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 PDE1AP54750 535 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 BEX3Q00994 111 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 NHLH1Q02575 133 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 TAP1Q03518 808 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 ICA1Q05084 483 aa10.98□□□□□ -0.65
UBE2D3-223ENST00000508249 ACVR2BQ13705 512 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms