RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ADCY3O60266 1144 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 DDAH1O94760 285 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 CASTP20810 708 aaKnown RBP21.21■□□□□ 0.99
NPHP4-210ENST00000506941 CYP2B6P20813 491 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 RPS6KB1P23443 525 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 SLC9C1Q4G0N8 1177 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 BLOC1S2Q6QNY1 142 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 NFXL1Q6ZNB6 911 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 ADGRF4Q8IZF3 695 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 TMTC2Q8N394 836 aa21.21■□□□□ 0.99
NPHP4-210ENST00000506941 KLRF2D3W0D1 207 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 STRNO43815 780 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 ADORA2AP29274 412 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 GRK4P32298 578 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 COPB2P35606 906 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 MAP2K5Q13163 448 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 RAB11FIP4Q86YS3 637 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 NUP133Q8WUM0 1156 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 ARMC5Q96C12 935 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 HOMER2Q9NSB8 354 aa21.2■□□□□ 0.98
NPHP4-210ENST00000506941 KIAA0100Q14667 2235 aaKnown RBP21.2■□□□□ 0.98
NPHP4-210ENST00000506941 ICAM1P05362 532 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 RXRAP19793 462 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 PSMA5P28066 241 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 RGS2P41220 211 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 CCL14Q16627 93 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 NBPF11Q86T75 865 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 ABRAQ8N0Z2 381 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 SLAIN1Q8ND83 568 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 PXYLP1Q8TE99 480 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 MAP3K14Q99558 947 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 APBA2Q99767 749 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 JMJD4Q9H9V9 463 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 ZSWIM6Q9HCJ5 1215 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 BRPF3Q9ULD4 1205 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 CCPG1Q9ULG6 757 aa21.19■□□□□ 0.98
NPHP4-210ENST00000506941 COBLO75128 1261 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 FCER1AP12319 257 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 XRCC5P13010 732 aaKnown RBP21.18■□□□□ 0.98
NPHP4-210ENST00000506941 ALAS1P13196 640 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 CDC37Q16543 378 aaPredicted RBP21.18■□□□□ 0.98
NPHP4-210ENST00000506941 APOA5Q6Q788 366 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 Q6ZUG5 572 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.18■□□□□ 0.98
NPHP4-210ENST00000506941 NPLOC4Q8TAT6 608 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 TRIB2Q92519 343 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 ZNF333Q96JL9 665 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 MMP19Q99542 508 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 RNF146Q9NTX7 359 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 SLC12A7Q9Y666 1083 aa21.18■□□□□ 0.98
NPHP4-210ENST00000506941 HOXC6P09630 235 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 MUM1L1Q5H9M0 696 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 RUFY3Q7L099 469 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 CCDC144CPQ8IYA2 1237 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 CHST13Q8NET6 341 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 TRERF1Q96PN7 1200 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 AGXT2Q9BYV1 514 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 UPF3BQ9BZI7 483 aaKnown RBP21.17■□□□□ 0.98
NPHP4-210ENST00000506941 TM6SF1Q9BZW5 370 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 VAT1LQ9HCJ6 419 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 FLRT1Q9NZU1 646 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 LRRC37A2A6NM11 1700 aa21.17■□□□□ 0.98
NPHP4-210ENST00000506941 CYTH3O43739 400 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 DHX16O60231 1041 aaKnown RBP21.16■□□□□ 0.98
NPHP4-210ENST00000506941 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
NPHP4-210ENST00000506941 PGK2P07205 417 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 TRIM32Q13049 653 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 QRICH1Q2TAL8 776 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 MICU3Q86XE3 530 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 FBXL16Q8N461 479 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 CTCFLQ8NI51 663 aaPredicted RBP21.16■□□□□ 0.98
NPHP4-210ENST00000506941 MTMR8Q96EF0 704 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 IL17RAQ96F46 866 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 ACAD9Q9H845 621 aa21.16■□□□□ 0.98
NPHP4-210ENST00000506941 KLF18A0A0U1RQI7 1052 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 PLEKHA8P1O95397 391 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 INHAP05111 366 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 CALM1P0DP23 149 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 CALM2P0DP24 149 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 CALM3P0DP25 149 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 ANAPC15P60006 121 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 APOBRQ0VD83 1088 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 KCTD2Q14681 263 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 DPP9Q86TI2 863 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 BRF1Q92994 677 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 RIOX1Q9H6W3 641 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 FBXO40Q9UH90 709 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 CYP46A1Q9Y6A2 500 aa21.15■□□□□ 0.98
NPHP4-210ENST00000506941 DNAJC25-GNG10A0A024R161 153 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 CCDC85CA6NKD9 419 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 MYCP01106 439 aaPredicted RBP21.14■□□□□ 0.97
NPHP4-210ENST00000506941 IGHA2P01877 340 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 HMGCRP04035 888 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 KIF5BP33176 963 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 FGD1P98174 961 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 TOB2Q14106 344 aaPredicted RBP21.14■□□□□ 0.97
NPHP4-210ENST00000506941 MTFR1Q15390 333 aa21.14■□□□□ 0.97
NPHP4-210ENST00000506941 FANCBQ8NB91 859 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms