RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZKSCAN1P17029 563 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 SLC4A3P48751 1232 aa21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 STAG2Q8N3U4 1231 aa21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 FLRT1Q9NZU1 646 aa21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 BIN2Q9UBW5 565 aaPredicted RBP21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 MAD2L2Q9UI95 211 aa21.33■■□□□ 1.01
PDLIM7-216ENST00000506537 ZNFX1Q9P2E3 1918 aaKnown RBP21.33■■□□□ 1
PDLIM7-216ENST00000506537 SMCHD1A6NHR9 2005 aa21.33■■□□□ 1
PDLIM7-216ENST00000506537 EPB41L2O43491 1005 aaKnown RBP21.32■■□□□ 1
PDLIM7-216ENST00000506537 FCER1AP12319 257 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 TROAPQ12815 778 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 GRM4Q14833 912 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.32■■□□□ 1
PDLIM7-216ENST00000506537 TMEM87BQ96K49 555 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 MMP19Q99542 508 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 USP26Q9BXU7 913 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 HOMER2Q9NSB8 354 aa21.32■■□□□ 1
PDLIM7-216ENST00000506537 POTEFA5A3E0 1075 aa21.31■■□□□ 1
PDLIM7-216ENST00000506537 IGHA2P01877 340 aa21.31■■□□□ 1
PDLIM7-216ENST00000506537 ICAM1P05362 532 aa21.31■■□□□ 1
PDLIM7-216ENST00000506537 EXOSC10Q01780 885 aaKnown RBP21.31■■□□□ 1
PDLIM7-216ENST00000506537 KRT32Q14532 448 aa21.31■■□□□ 1
PDLIM7-216ENST00000506537 SLC35G1Q2M3R5 365 aa21.31■■□□□ 1
PDLIM7-216ENST00000506537 TCEANC2Q96MN5 208 aa21.31■■□□□ 1
PDLIM7-216ENST00000506537 PLXNA1Q9UIW2 1896 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 PALM3A6NDB9 673 aaPredicted RBP21.3■■□□□ 1
PDLIM7-216ENST00000506537 PGK2P07205 417 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 CCL5P13501 91 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 CPA1P15085 419 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 UBXN2AP68543 259 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 KCTD2Q14681 263 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 DPP9Q86TI2 863 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 ADGRF4Q8IZF3 695 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 ZNF654Q8IZM8 581 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 CHST13Q8NET6 341 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 MYL10Q9BUA6 226 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 UNC93B1Q9H1C4 597 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 RNF146Q9NTX7 359 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 CCPG1Q9ULG6 757 aa21.3■■□□□ 1
PDLIM7-216ENST00000506537 WDR19Q8NEZ3 1342 aa21.29■■□□□ 1
PDLIM7-216ENST00000506537 KIAA0100Q14667 2235 aaKnown RBP21.29■■□□□ 1
PDLIM7-216ENST00000506537 ALAS1P13196 640 aa21.29■■□□□ 1
PDLIM7-216ENST00000506537 LIFRP42702 1097 aa21.29■■□□□ 1
PDLIM7-216ENST00000506537 MUM1L1Q5H9M0 696 aa21.29■■□□□ 1
PDLIM7-216ENST00000506537 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
PDLIM7-216ENST00000506537 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
PDLIM7-216ENST00000506537 CATIPQ7Z7H3 387 aa21.29■■□□□ 1
PDLIM7-216ENST00000506537 TRMT44Q8IYL2 757 aaKnown RBP21.29■■□□□ 1
PDLIM7-216ENST00000506537 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
PDLIM7-216ENST00000506537 KLRF2D3W0D1 207 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 ZNF792Q3KQV3 632 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 TKFCQ3LXA3 575 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 TRERF1Q96PN7 1200 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 ACAD9Q9H845 621 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 JMJD4Q9H9V9 463 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 FBXO40Q9UH90 709 aa21.28■■□□□ 1
PDLIM7-216ENST00000506537 DNAJC25-GNG10A0A024R161 153 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 DDAH1O94760 285 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 PRKAR2AP13861 404 aaKnown RBP21.27■■□□□ 1
PDLIM7-216ENST00000506537 CACNB2Q08289 660 aaPredicted RBP21.27■■□□□ 1
PDLIM7-216ENST00000506537 CDC37Q16543 378 aaPredicted RBP21.27■■□□□ 1
PDLIM7-216ENST00000506537 OLFML2BQ68BL8 750 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 NFXL1Q6ZNB6 911 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 SGMS1Q86VZ5 419 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 NUP133Q8WUM0 1156 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 MAML3Q96JK9 1138 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 LCTP09848 1927 aa21.27■■□□□ 1
PDLIM7-216ENST00000506537 CCDC69A6NI79 296 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 RXRAP19793 462 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 CYP2C19P33261 490 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 RAB11FIP4Q86YS3 637 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 TMTC2Q8N394 836 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 MTMR8Q96EF0 704 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 FGD4Q96M96 766 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 TMEM106CQ9BVX2 250 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 RNF208Q9H0X6 261 aa21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 A1CFQ9NQ94 594 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 PAK6Q9NQU5 681 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-216ENST00000506537 CYTH3O43739 400 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 HMGB1P09429 215 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 QRICH1Q2TAL8 776 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 ANKRD35Q8N283 1001 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 SHISA4Q96DD7 197 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 MAP3K14Q99558 947 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 VAT1LQ9HCJ6 419 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 SLC5A4Q9NY91 659 aa21.25■□□□□ 0.99
PDLIM7-216ENST00000506537 MKI67P46013 3256 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 MYH6P13533 1939 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 NFIBO00712 420 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 DHX16O60231 1041 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 SEC24BO95487 1268 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 EN2P19622 333 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 MFSD14CQ5VZR4 134 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 BLOC1S2Q6QNY1 142 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 CLEC4DQ8WXI8 215 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 DDX11Q96FC9 970 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 RIOX1Q9H6W3 641 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 BRPF3Q9ULD4 1205 aa21.24■□□□□ 0.99
PDLIM7-216ENST00000506537 DIS3Q9Y2L1 958 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms