RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 CHST3Q7LGC8 479 aa19.48■□□□□ 0.71
SNCA-209ENST00000506244 HOMER2Q9NSB8 354 aa19.48■□□□□ 0.71
SNCA-209ENST00000506244 RNF146Q9NTX7 359 aa19.48■□□□□ 0.71
SNCA-209ENST00000506244 ZNF536O15090 1300 aa19.48■□□□□ 0.71
SNCA-209ENST00000506244 RPTORQ8N122 1335 aa19.48■□□□□ 0.71
SNCA-209ENST00000506244 WDR19Q8NEZ3 1342 aa19.48■□□□□ 0.71
SNCA-209ENST00000506244 GJB1P08034 283 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 GOLGA8HP0CJ92 632 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 PRKAR2AP13861 404 aaKnown RBP19.47■□□□□ 0.71
SNCA-209ENST00000506244 RGS19P49795 217 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 CCL14Q16627 93 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 ANKRD35Q8N283 1001 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 NEK1Q96PY6 1258 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 UNC93B1Q9H1C4 597 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 HMX1Q9NP08 348 aaPredicted RBP19.47■□□□□ 0.71
SNCA-209ENST00000506244 DIS3Q9Y2L1 958 aaKnown RBP19.47■□□□□ 0.71
SNCA-209ENST00000506244 RIPK3Q9Y572 518 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 PFASO15067 1338 aa19.47■□□□□ 0.71
SNCA-209ENST00000506244 KIAA0100Q14667 2235 aaKnown RBP19.47■□□□□ 0.71
SNCA-209ENST00000506244 CCDC69A6NI79 296 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
SNCA-209ENST00000506244 DDAH1O94760 285 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 ALAS1P13196 640 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 HSPA4P34932 840 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 MAP3K21Q5TCX8 1036 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 NFXL1Q6ZNB6 911 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 NPLOC4Q8TAT6 608 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 IGDCC4Q8TDY8 1250 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 AGBL1Q96MI9 1066 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 TRERF1Q96PN7 1200 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.46■□□□□ 0.71
SNCA-209ENST00000506244 LY9Q9HBG7 655 aa19.46■□□□□ 0.71
SNCA-209ENST00000506244 PAK6Q9NQU5 681 aaPredicted RBP19.46■□□□□ 0.71
SNCA-209ENST00000506244 POTEFA5A3E0 1075 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 SH2B2O14492 632 aaPredicted RBP19.45■□□□□ 0.7
SNCA-209ENST00000506244 COBLO75128 1261 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 KIF5BP33176 963 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 LIFRP42702 1097 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 GRM4Q14833 912 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 MAML3Q96JK9 1138 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 MAP3K14Q99558 947 aa19.45■□□□□ 0.7
SNCA-209ENST00000506244 PLXNA1Q9UIW2 1896 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 PGK2P07205 417 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 CALM1P0DP23 149 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 CALM2P0DP24 149 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 CALM3P0DP25 149 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 GJA8P48165 433 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 SNAP25P60880 206 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 TROAPQ12815 778 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 CDC37Q16543 378 aaPredicted RBP19.44■□□□□ 0.7
SNCA-209ENST00000506244 ZNF654Q8IZM8 581 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 MSL3Q8N5Y2 521 aaKnown RBP19.44■□□□□ 0.7
SNCA-209ENST00000506244 CTCFLQ8NI51 663 aaPredicted RBP19.44■□□□□ 0.7
SNCA-209ENST00000506244 KCNB2Q92953 911 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 UBA5Q9GZZ9 404 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 FLRT1Q9NZU1 646 aa19.44■□□□□ 0.7
SNCA-209ENST00000506244 KLRF2D3W0D1 207 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 PSMA5P28066 241 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 CACNB2Q08289 660 aaPredicted RBP19.43■□□□□ 0.7
SNCA-209ENST00000506244 TRIM32Q13049 653 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 ZNF792Q3KQV3 632 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 DHX32Q7L7V1 743 aaKnown RBP19.43■□□□□ 0.7
SNCA-209ENST00000506244 RASEFQ8IZ41 740 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 ADGRF4Q8IZF3 695 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 U2AF1L4Q8WU68 220 aaKnown RBP19.43■□□□□ 0.7
SNCA-209ENST00000506244 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 MAD2L2Q9UI95 211 aa19.43■□□□□ 0.7
SNCA-209ENST00000506244 ZNFX1Q9P2E3 1918 aaKnown RBP19.43■□□□□ 0.7
SNCA-209ENST00000506244 DNAJC25-GNG10A0A024R161 153 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 PALM3A6NDB9 673 aaPredicted RBP19.42■□□□□ 0.7
SNCA-209ENST00000506244 MSCO60682 206 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 MLLT1Q03111 559 aaPredicted RBP19.42■□□□□ 0.7
SNCA-209ENST00000506244 TRAF1Q13077 416 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 SYNE3Q6ZMZ3 975 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 ZNF467Q7Z7K2 595 aaPredicted RBP19.42■□□□□ 0.7
SNCA-209ENST00000506244 NUP133Q8WUM0 1156 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 DEFB118Q96PH6 123 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 SENP2Q9HC62 589 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 A1CFQ9NQ94 594 aaKnown RBP19.42■□□□□ 0.7
SNCA-209ENST00000506244 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
SNCA-209ENST00000506244 POTEB2H3BUK9 544 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 SGPL1O95470 568 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 CYP2C19P33261 490 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 FGD1P98174 961 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 SGMS1Q86VZ5 419 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 STAG2Q8N3U4 1231 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 JAKMIP1Q96N16 626 aaKnown RBP19.41■□□□□ 0.7
SNCA-209ENST00000506244 TINF2Q9BSI4 451 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 MAF1Q9H063 256 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 CPVLQ9H3G5 476 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 SNX14Q9Y5W7 946 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 ABCB11O95342 1321 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 SYNGAP1Q96PV0 1343 aa19.41■□□□□ 0.7
SNCA-209ENST00000506244 IGHA2P01877 340 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 CYBAP13498 195 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 EN2P19622 333 aaPredicted RBP19.4■□□□□ 0.7
SNCA-209ENST00000506244 GNAQP50148 359 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 ADCK5Q3MIX3 580 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 BLOC1S2Q6QNY1 142 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms