RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 MIGA1Q8NAN2 632 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 SPC24Q8NBT2 197 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 FAM81AQ8TBF8 368 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 SEC62Q99442 399 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 IDI2Q9BXS1 227 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 IL25Q9H293 177 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 RGL1Q9NZL6 768 aa10.82□□□□□ -0.68
PDLIM5-207ENST00000503974 GPAA1O43292 621 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 WDHD1O75717 1129 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 MBD4O95243 580 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 SLC8A3P57103 927 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 MCMDC2Q4G0Z9 681 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 RCSD1Q6JBY9 416 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 STAG2Q8N3U4 1231 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 STRBPQ96SI9 672 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 TDRD3Q9H7E2 651 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 ZNF70Q9UC06 446 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 RPAP1Q9BWH6 1393 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 ASTN2O75129 1339 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 CCDC171Q6TFL3 1326 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 MYO1BO43795 1136 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 PTGS1P23219 599 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 YY1P25490 414 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 PSMC1P62191 440 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 INF2Q27J81 1249 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 TLDC1Q6P9B6 456 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 SDCCAG8Q86SQ7 713 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 ZNF589Q86UQ0 364 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 LSM14AQ8ND56 463 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 OR8K1Q8NGG5 319 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 BICD2Q8TD16 824 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 SH3RF3Q8TEJ3 882 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 KCNN1Q92952 543 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 AIDAQ96BJ3 306 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 TMX3Q96JJ7 454 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 ARMT1Q9H993 441 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 L2HGDHQ9H9P8 463 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 USP40Q9NVE5 1235 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 MRFAP1Q9Y605 127 aa10.81□□□□□ -0.68
PDLIM5-207ENST00000503974 LAMB1P07942 1786 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 CNTNAP1P78357 1384 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 FOXP2O15409 715 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 AP5Z1O43299 807 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 FLT3P36888 993 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 LIG3P49916 1009 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 PKN1Q16512 942 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 MAB21L3Q8N8X9 362 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 RUFY2Q8WXA3 655 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 DHRS1Q96LJ7 313 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 EPAS1Q99814 870 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 PHACTR1Q9C0D0 580 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 IRF2BPLQ9H1B7 796 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 GPBP1L1Q9HC44 474 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 GGA3Q9NZ52 723 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 TBC1D7Q9P0N9 293 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 SIPA1L1O43166 1804 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 ATRNL1Q5VV63 1379 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 ZMYM6O95789 1325 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 SPDYE3A6NKU9 549 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 ENTPD3O75355 529 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 GNAT2P19087 354 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 CASTP20810 708 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 PRPF4BQ13523 1007 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 RRP12Q5JTH9 1297 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 ANGEL2Q5VTE6 544 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 FAM83AQ86UY5 434 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 LDHDQ86WU2 507 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 APOBEC3FQ8IUX4 373 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 ESYT1Q9BSJ8 1104 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 CRNKL1Q9BZJ0 848 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 NACA2Q9H009 215 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 DDX4Q9NQI0 724 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 FAM198AQ9UFP1 575 aa10.8□□□□□ -0.68
PDLIM5-207ENST00000503974 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 MYH1P12882 1939 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 LAMA4Q16363 1823 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 FLT1P17948 1338 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 CLRN2A0PK11 232 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 AHCYL1O43865 530 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 OPA1O60313 960 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 SKAP2O75563 359 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 CYP11B2P19099 503 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 CDR1P51861 262 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 NFIAQ12857 509 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 KCNB1Q14721 858 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 GIMAP6Q6P9H5 292 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 CCDC129Q6ZRS4 1044 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 POTEDQ86YR6 584 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 MFN1Q8IWA4 741 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 ZNF784Q8NCA9 323 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 NEK9Q8TD19 979 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 TRAIPQ9BWF2 469 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 CD248Q9HCU0 757 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 TRPV5Q9NQA5 729 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 RTEL1Q9NZ71 1219 aa10.79□□□□□ -0.68
PDLIM5-207ENST00000503974 TMOD2Q9NZR1 351 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms