RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ALAS1P13196 640 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 CAPN2P17655 700 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 CYP2C19P33261 490 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 SEC23AQ15436 765 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 TKFCQ3LXA3 575 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 OLFML2BQ68BL8 750 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 TRERF1Q96PN7 1200 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 UBA5Q9GZZ9 404 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 RANBP17Q9H2T7 1088 aaKnown RBP14.98□□□□□ -0.01
HSPG2-213ENST00000498495 HOMER2Q9NSB8 354 aa14.98□□□□□ -0.01
HSPG2-213ENST00000498495 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
HSPG2-213ENST00000498495 WTAPQ15007 396 aa14.97□□□□□ -0.01
HSPG2-213ENST00000498495 ZNF792Q3KQV3 632 aa14.97□□□□□ -0.01
HSPG2-213ENST00000498495 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
HSPG2-213ENST00000498495 MAML3Q96JK9 1138 aa14.97□□□□□ -0.01
HSPG2-213ENST00000498495 ACAD9Q9H845 621 aa14.97□□□□□ -0.01
HSPG2-213ENST00000498495 CCPG1Q9ULG6 757 aa14.97□□□□□ -0.01
HSPG2-213ENST00000498495 ICAM1P05362 532 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 CNGA1P29973 690 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 CCND3P30281 292 aaPredicted RBP14.96□□□□□ -0.01
HSPG2-213ENST00000498495 MCM5P33992 734 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 TMEM67Q5HYA8 995 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 MB21D2Q8IYB1 491 aaPredicted RBP14.96□□□□□ -0.01
HSPG2-213ENST00000498495 IGDCC4Q8TDY8 1250 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 RNF146Q9NTX7 359 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 PNMA2Q9UL42 364 aa14.96□□□□□ -0.01
HSPG2-213ENST00000498495 DHX16O60231 1041 aaKnown RBP14.95□□□□□ -0.02
HSPG2-213ENST00000498495 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.95□□□□□ -0.02
HSPG2-213ENST00000498495 SHISA4Q96DD7 197 aa14.95□□□□□ -0.02
HSPG2-213ENST00000498495 TINF2Q9BSI4 451 aa14.95□□□□□ -0.02
HSPG2-213ENST00000498495 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
HSPG2-213ENST00000498495 CRISPLD2Q9H0B8 497 aa14.95□□□□□ -0.02
HSPG2-213ENST00000498495 CPVLQ9H3G5 476 aa14.95□□□□□ -0.02
HSPG2-213ENST00000498495 VAT1LQ9HCJ6 419 aa14.95□□□□□ -0.02
HSPG2-213ENST00000498495 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
HSPG2-213ENST00000498495 DNAJC25-GNG10A0A024R161 153 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 PRC1O43663 620 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 IGHA2P01877 340 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 ANTXR2P58335 489 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 PRAMEF19Q5SWL8 479 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 CATIPQ7Z7H3 387 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 TMTC2Q8N394 836 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 TMEM87BQ96K49 555 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 NEK1Q96PY6 1258 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 SENP2Q9HC62 589 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 KIAA0100Q14667 2235 aaKnown RBP14.94□□□□□ -0.02
HSPG2-213ENST00000498495 HTTP42858 3142 aa14.94□□□□□ -0.02
HSPG2-213ENST00000498495 RBBP6Q7Z6E9 1792 aaKnown RBP14.93□□□□□ -0.02
HSPG2-213ENST00000498495 KLRF2D3W0D1 207 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 MSCO60682 206 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 REC8O95072 547 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 MUM1L1Q5H9M0 696 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 NSMFQ6X4W1 530 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 NFXL1Q6ZNB6 911 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 STAG2Q8N3U4 1231 aa14.93□□□□□ -0.02
HSPG2-213ENST00000498495 MSL3Q8N5Y2 521 aaKnown RBP14.93□□□□□ -0.02
HSPG2-213ENST00000498495 A1CFQ9NQ94 594 aaKnown RBP14.93□□□□□ -0.02
HSPG2-213ENST00000498495 ZNF236Q9UL36 1845 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 PALM3A6NDB9 673 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-213ENST00000498495 CCDC69A6NI79 296 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-213ENST00000498495 CYBAP13498 195 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 KRT32Q14532 448 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-213ENST00000498495 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 LHX8Q68G74 356 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 ZNF467Q7Z7K2 595 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-213ENST00000498495 RASEFQ8IZ41 740 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 ANKLE1Q8NAG6 615 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 TRPV1Q8NER1 839 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 NUP133Q8WUM0 1156 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 LY9Q9HBG7 655 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 DDX20Q9UHI6 824 aaKnown RBP14.92□□□□□ -0.02
HSPG2-213ENST00000498495 NRBP1Q9UHY1 535 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 MAD2L2Q9UI95 211 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 OGDHLQ9ULD0 1010 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 CNPY2Q9Y2B0 182 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 PFASO15067 1338 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 WDR19Q8NEZ3 1342 aa14.92□□□□□ -0.02
HSPG2-213ENST00000498495 CENPFP49454 3210 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 SEPT4O43236 478 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 TAL1P17542 331 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-213ENST00000498495 CNTN2Q02246 1040 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 TROAPQ12815 778 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 GRM4Q14833 912 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 USH1GQ495M9 461 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 MAMDC4Q6UXC1 1216 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 FAM133AQ8N9E0 248 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 JMJD4Q9H9V9 463 aa14.91□□□□□ -0.02
HSPG2-213ENST00000498495 GPHNQ9NQX3 736 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-213ENST00000498495 PTPDC1A2A3K4 754 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-213ENST00000498495 HSPA4P34932 840 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 LIFRP42702 1097 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 BAATQ14032 418 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-213ENST00000498495 DHX32Q7L7V1 743 aaKnown RBP14.9□□□□□ -0.02
HSPG2-213ENST00000498495 NECAB2Q7Z6G3 386 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms