RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 AGBL1Q96MI9 1066 aa19.57■□□□□ 0.72
ABCF3-218ENST00000498136 SLC27A2O14975 620 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 SNHG28P0DPA3 235 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 ALAS1P13196 640 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 CNGA1P29973 690 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 CCND3P30281 292 aaPredicted RBP19.56■□□□□ 0.72
ABCF3-218ENST00000498136 MAP3K21Q5TCX8 1036 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 OLFML2BQ68BL8 750 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 BTNL9Q6UXG8 535 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 CHST3Q7LGC8 479 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 CHST13Q8NET6 341 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 MAML3Q96JK9 1138 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 CCPG1Q9ULG6 757 aa19.56■□□□□ 0.72
ABCF3-218ENST00000498136 ZNF536O15090 1300 aa19.55■□□□□ 0.72
ABCF3-218ENST00000498136 CREB3L3Q68CJ9 461 aa19.55■□□□□ 0.72
ABCF3-218ENST00000498136 TRERF1Q96PN7 1200 aa19.55■□□□□ 0.72
ABCF3-218ENST00000498136 RANBP17Q9H2T7 1088 aaKnown RBP19.55■□□□□ 0.72
ABCF3-218ENST00000498136 ACAD9Q9H845 621 aa19.55■□□□□ 0.72
ABCF3-218ENST00000498136 RNF146Q9NTX7 359 aa19.55■□□□□ 0.72
ABCF3-218ENST00000498136 WTAPQ15007 396 aa19.54■□□□□ 0.72
ABCF3-218ENST00000498136 SEC23AQ15436 765 aa19.54■□□□□ 0.72
ABCF3-218ENST00000498136 TKFCQ3LXA3 575 aa19.54■□□□□ 0.72
ABCF3-218ENST00000498136 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
ABCF3-218ENST00000498136 RNF20Q5VTR2 975 aa19.54■□□□□ 0.72
ABCF3-218ENST00000498136 DHX16O60231 1041 aaKnown RBP19.53■□□□□ 0.72
ABCF3-218ENST00000498136 ICAM1P05362 532 aa19.53■□□□□ 0.72
ABCF3-218ENST00000498136 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
ABCF3-218ENST00000498136 NECTIN1Q15223 517 aa19.53■□□□□ 0.72
ABCF3-218ENST00000498136 ZNF792Q3KQV3 632 aa19.53■□□□□ 0.72
ABCF3-218ENST00000498136 TMEM67Q5HYA8 995 aa19.53■□□□□ 0.72
ABCF3-218ENST00000498136 UBA5Q9GZZ9 404 aa19.53■□□□□ 0.72
ABCF3-218ENST00000498136 CPVLQ9H3G5 476 aa19.53■□□□□ 0.72
ABCF3-218ENST00000498136 TNRC18O15417 2968 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-218ENST00000498136 FARP2O94887 1054 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-218ENST00000498136 MB21D2Q8IYB1 491 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-218ENST00000498136 DIS3Q9Y2L1 958 aaKnown RBP19.52■□□□□ 0.72
ABCF3-218ENST00000498136 MYH6P13533 1939 aa19.52■□□□□ 0.72
ABCF3-218ENST00000498136 FRMPD3Q5JV73 1810 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 TAL1P17542 331 aaPredicted RBP19.51■□□□□ 0.71
ABCF3-218ENST00000498136 CAPN2P17655 700 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 ANTXR2P58335 489 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 MUM1L1Q5H9M0 696 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 TINF2Q9BSI4 451 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 CRISPLD2Q9H0B8 497 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 SMCHD1A6NHR9 2005 aa19.51■□□□□ 0.71
ABCF3-218ENST00000498136 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 PRC1O43663 620 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 CYBAP13498 195 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 MCM5P33992 734 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 PRAMEF19Q5SWL8 479 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 NSMFQ6X4W1 530 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.5■□□□□ 0.71
ABCF3-218ENST00000498136 ADGRF4Q8IZF3 695 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 VAT1LQ9HCJ6 419 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
ABCF3-218ENST00000498136 PFASO15067 1338 aa19.5■□□□□ 0.71
ABCF3-218ENST00000498136 DNAJC25-GNG10A0A024R161 153 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 CDC37Q16543 378 aaPredicted RBP19.49■□□□□ 0.71
ABCF3-218ENST00000498136 USH1GQ495M9 461 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 NFXL1Q6ZNB6 911 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 STAG2Q8N3U4 1231 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 TRPV1Q8NER1 839 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 SENP2Q9HC62 589 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 DDX20Q9UHI6 824 aaKnown RBP19.49■□□□□ 0.71
ABCF3-218ENST00000498136 PNMA2Q9UL42 364 aa19.49■□□□□ 0.71
ABCF3-218ENST00000498136 MKI67P46013 3256 aaKnown RBP19.49■□□□□ 0.71
ABCF3-218ENST00000498136 MSCO60682 206 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 IGHA2P01877 340 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 CNTN2Q02246 1040 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 ANKLE1Q8NAG6 615 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 IGDCC4Q8TDY8 1250 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 PAWRQ96IZ0 340 aaKnown RBP19.48■□□□□ 0.71
ABCF3-218ENST00000498136 OGDHLQ9ULD0 1010 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 CNPY2Q9Y2B0 182 aa19.48■□□□□ 0.71
ABCF3-218ENST00000498136 MCM3APO60318 1980 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 PTPDC1A2A3K4 754 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 CCDC69A6NI79 296 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 KLRF2D3W0D1 207 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 SEPT4O43236 478 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 REC8O95072 547 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 ANO1Q5XXA6 986 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 LHX8Q68G74 356 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 MSL3Q8N5Y2 521 aaKnown RBP19.47■□□□□ 0.71
ABCF3-218ENST00000498136 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 HTATIP2Q9BUP3 242 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 LY9Q9HBG7 655 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 CYP39A1Q9NYL5 469 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 WDR19Q8NEZ3 1342 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 SYNGAP1Q96PV0 1343 aa19.47■□□□□ 0.71
ABCF3-218ENST00000498136 NFIBO00712 420 aa19.46■□□□□ 0.71
ABCF3-218ENST00000498136 MYCNP04198 464 aaPredicted RBP19.46■□□□□ 0.71
ABCF3-218ENST00000498136 GRM4Q14833 912 aa19.46■□□□□ 0.71
ABCF3-218ENST00000498136 NECAB2Q7Z6G3 386 aa19.46■□□□□ 0.71
ABCF3-218ENST00000498136 ZNF467Q7Z7K2 595 aaPredicted RBP19.46■□□□□ 0.71
ABCF3-218ENST00000498136 DIS3LQ8TF46 1054 aaKnown RBP19.46■□□□□ 0.71
ABCF3-218ENST00000498136 NEK1Q96PY6 1258 aa19.46■□□□□ 0.71
ABCF3-218ENST00000498136 MTA3Q9BTC8 594 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms