RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 NT5C2P49902 561 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 SNAP25P60880 206 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 LRRC41Q15345 812 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 TKFCQ3LXA3 575 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 TTC22Q5TAA0 569 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 ANKRD35Q8N283 1001 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 TTC14Q96N46 770 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 DSCC1Q9BVC3 393 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 RNF41Q9H4P4 317 aaPredicted RBP8.51□□□□□ -1.05
VPS52-221ENST00000495755 ACAD9Q9H845 621 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 ISY1Q9ULR0 285 aaKnown RBP8.51□□□□□ -1.05
VPS52-221ENST00000495755 CNPY2Q9Y2B0 182 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 FRMPD3Q5JV73 1810 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 NEDD4P46934 1319 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 KBTBD13C9JR72 458 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 SNHG28P0DPA3 235 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 RARBP10826 455 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 PDHBP11177 359 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 AKR1A1P14550 325 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 SYN1P17600 705 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 SLC16A2P36021 539 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 ADCYAP1R1P41586 468 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 MAGEA10P43363 369 aaPredicted RBP8.5□□□□□ -1.05
VPS52-221ENST00000495755 ATN1P54259 1190 aaPredicted RBP8.5□□□□□ -1.05
VPS52-221ENST00000495755 CNTN2Q02246 1040 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 IKQ13123 557 aaPredicted RBP8.5□□□□□ -1.05
VPS52-221ENST00000495755 TTBK2Q6IQ55 1244 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 CCDC174Q6PII3 467 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 SLC39A5Q6ZMH5 540 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 DGKHQ86XP1 1220 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 FAM133AQ8N9E0 248 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 ANKS1AQ92625 1134 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 ESR2Q92731 530 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 TRERF1Q96PN7 1200 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 IL25Q9H293 177 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
VPS52-221ENST00000495755 A1CFQ9NQ94 594 aaKnown RBP8.5□□□□□ -1.05
VPS52-221ENST00000495755 XPNPEP3Q9NQH7 507 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 HOMER2Q9NSB8 354 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 RNF146Q9NTX7 359 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.5□□□□□ -1.05
VPS52-221ENST00000495755 CTNNA3Q9UI47 895 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 PLXNA1Q9UIW2 1896 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 FAM184BQ9ULE4 1060 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
VPS52-221ENST00000495755 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 POTEB2H3BUK9 544 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ADAMTS4O75173 837 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 PGK1P00558 417 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ICAM1P05362 532 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ALAS1P13196 640 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 RTP1P59025 263 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ZNF543Q08ER8 600 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ACVR2BQ13705 512 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 SNX17Q15036 470 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 CCDC96Q2M329 555 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 MUM1L1Q5H9M0 696 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 SYDE2Q5VT97 1194 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 C1orf53Q5VUE5 145 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 KATNBL1Q9H079 304 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ABHD16BQ9H3Z7 469 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 CYP39A1Q9NYL5 469 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 ZSWIM5Q9P217 1185 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 PHF24Q9UPV7 400 aa8.49□□□□□ -1.05
VPS52-221ENST00000495755 FRMPD2Q68DX3 1309 aaPredicted RBP8.49□□□□□ -1.05
VPS52-221ENST00000495755 SMCHD1A6NHR9 2005 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 KDM4AO75164 1064 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 DUSP11O75319 330 aaKnown RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 MYCNP04198 464 aaPredicted RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 CHMLP26374 656 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 IMMTQ16891 758 aaKnown RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 CCDC178Q5BJE1 867 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 CCSAPQ6IQ19 270 aaPredicted RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 ARMCX2Q7L311 632 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 RNF180Q86T96 592 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 KLHDC9Q8NEP7 349 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 FERMT2Q96AC1 680 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 LENG1Q96BZ8 264 aaPredicted RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 ZKSCAN3Q9BRR0 538 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 PCDH10Q9P2E7 1040 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 ZHX1Q9UKY1 873 aaPredicted RBP8.48□□□□□ -1.05
VPS52-221ENST00000495755 CCPG1Q9ULG6 757 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 ASTN1O14525 1302 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 RAD50Q92878 1312 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 COL6A3P12111 3177 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 A0A0C4DFX4 3053 aa8.48□□□□□ -1.05
VPS52-221ENST00000495755 A0A1W2PQ45 241 aaPredicted RBP8.47□□□□□ -1.05
VPS52-221ENST00000495755 A0A1W2PQY0 241 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 ASB14A6NK59 587 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 B4E1Z4 1266 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 SOX1O00570 391 aaPredicted RBP8.47□□□□□ -1.05
VPS52-221ENST00000495755 ADCY6O43306 1168 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 GOLGA8HP0CJ92 632 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 ACLYP53396 1101 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 NKX3-2P78367 333 aa8.47□□□□□ -1.05
VPS52-221ENST00000495755 CCDC144BQ3MJ40 725 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms