RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SLC5A4Q9NY91 659 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 SYNPO2Q9UMS6 1093 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 ZNF536O15090 1300 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 DNAJC25-GNG10A0A024R161 153 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 ATP2A1O14983 1001 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 SEPT4O43236 478 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 MSCO60682 206 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 RCSD1Q6JBY9 416 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 STAG1Q8WVM7 1258 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 FGD4Q96M96 766 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 TINF2Q9BSI4 451 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 HOMER2Q9NSB8 354 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 CTDP1Q9Y5B0 961 aaPredicted RBP10.1□□□□□ -0.79
LRCH3-219ENST00000494069 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
LRCH3-219ENST00000494069 DNM1LO00429 736 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 SNAI1O95863 264 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 GSPT1P15170 499 aaKnown RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 COPB2P35606 906 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 SLC16A2P36021 539 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 STAT2P52630 851 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 IRX5P78411 483 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 CNTN2Q02246 1040 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 IKQ13123 557 aaPredicted RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 TICAM2Q86XR7 235 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 GDF15Q99988 308 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 TMEM47Q9BQJ4 181 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 DIAPH3Q9NSV4 1193 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 PRR12Q9ULL5 1215 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 DIS3Q9Y2L1 958 aaKnown RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 DDX49Q9Y6V7 483 aaKnown RBP10.09□□□□□ -0.79
LRCH3-219ENST00000494069 SMCHD1A6NHR9 2005 aa10.09□□□□□ -0.79
LRCH3-219ENST00000494069 SZT2Q5T011 3432 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 NEDD4P46934 1319 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 FRMPD2Q68DX3 1309 aaPredicted RBP10.08□□□□□ -0.8
LRCH3-219ENST00000494069 PGK1P00558 417 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 MAGEA10P43363 369 aaPredicted RBP10.08□□□□□ -0.8
LRCH3-219ENST00000494069 OAZ1P54368 228 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 LRRC41Q15345 812 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 MUM1L1Q5H9M0 696 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 AKNAD1Q5T1N1 836 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 FAM160B2Q86V87 743 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 ANKRD35Q8N283 1001 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 CHURC1Q8WUH1 139 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 FERMT2Q96AC1 680 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 ZKSCAN3Q9BRR0 538 aa10.08□□□□□ -0.8
LRCH3-219ENST00000494069 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 PLXNA1Q9UIW2 1896 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 SOX1O00570 391 aaPredicted RBP10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ZNF213O14771 459 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ADCY6O43306 1168 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 PYGBP11216 843 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 TOP1P11387 765 aaKnown RBP10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ALAS1P13196 640 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ADCYAP1R1P41586 468 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 RTP1P59025 263 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 TTC22Q5TAA0 569 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 SLC39A5Q6ZMH5 540 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 MFSD6Q6ZSS7 791 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 CHST13Q8NET6 341 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 DCAF4Q8WV16 495 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 PURBQ96QR8 312 aaKnown RBP10.07□□□□□ -0.8
LRCH3-219ENST00000494069 A1CFQ9NQ94 594 aaKnown RBP10.07□□□□□ -0.8
LRCH3-219ENST00000494069 XPNPEP3Q9NQH7 507 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 TCP11L1Q9NUJ3 509 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ZHX1Q9UKY1 873 aaPredicted RBP10.07□□□□□ -0.8
LRCH3-219ENST00000494069 ASTN1O14525 1302 aa10.07□□□□□ -0.8
LRCH3-219ENST00000494069 MYADML2A6NDP7 307 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 B4E1Z4 1266 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 KBTBD13C9JR72 458 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 ATMINO43313 823 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-219ENST00000494069 PLA2G6O60733 806 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 RARBP10826 455 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 PDHBP11177 359 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 PTGS1P23219 599 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 MFAP1P55081 439 aaKnown RBP10.06□□□□□ -0.8
LRCH3-219ENST00000494069 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
LRCH3-219ENST00000494069 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 MAMDC4Q6UXC1 1216 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
LRCH3-219ENST00000494069 FAM133AQ8N9E0 248 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 TRERF1Q96PN7 1200 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 CPVLQ9H3G5 476 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 ACAD9Q9H845 621 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 FBXO40Q9UH90 709 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 NRBP1Q9UHY1 535 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 CNPY2Q9Y2B0 182 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 LAMA3Q16787 3333 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 SYNGAP1Q96PV0 1343 aa10.06□□□□□ -0.8
LRCH3-219ENST00000494069 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms