RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 MPHOSPH10O00566 681 aaKnown RBP12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 NRDCO43847 1150 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 AFMP43652 599 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 VAT1LQ9HCJ6 419 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 SYNPO2Q9UMS6 1093 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 R3HCC1Q9Y3T6 440 aaKnown RBP12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 ATP1A3P13637 1013 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 BAG6P46379 1132 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 KCNJ6P48051 423 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 TTLL6Q8N841 843 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 TMEM60Q9H2L4 133 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 JMJD4Q9H9V9 463 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 STAT6P42226 847 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 ZFPM1Q8IX07 1006 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
PHACTR4-204ENST00000493669 ZBTB5O15062 677 aa12.21□□□□□ -0.45
PHACTR4-204ENST00000493669 UBA7P41226 1012 aa12.21□□□□□ -0.45
PHACTR4-204ENST00000493669 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
PHACTR4-204ENST00000493669 FMR1Q06787 632 aaKnown RBP eCLIP12.21□□□□□ -0.45
PHACTR4-204ENST00000493669 SPATA1Q5VX52 437 aa12.21□□□□□ -0.45
PHACTR4-204ENST00000493669 GPCPD1Q9NPB8 672 aa12.21□□□□□ -0.45
PHACTR4-204ENST00000493669 SKILP12757 684 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 CCZ1BP86790 482 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 CCZ1P86791 482 aaPredicted RBP12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 SF3B2Q13435 895 aaKnown RBP12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 CUL4BQ13620 913 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 CCDC96Q2M329 555 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 CFAP100Q494V2 611 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 SH3BP5LQ7L8J4 393 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 VSTM4Q8IW00 320 aa12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 C17orf53Q8N3J3 647 aaPredicted RBP12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 GTPBP4Q9BZE4 634 aaKnown RBP12.21□□□□□ -0.46
PHACTR4-204ENST00000493669 CCNT1O60563 726 aaKnown RBP12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 SFPQP23246 707 aaKnown RBP eCLIP12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 LETM2Q2VYF4 491 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 RRAGBQ5VZM2 374 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 YDJCA8MPS7 323 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 C21orf2O43822 256 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 MRPL12P52815 198 aaKnown RBP12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 TCP10Q12799 353 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 TMOD2Q9NZR1 351 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 SYNRGQ9UMZ2 1314 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 KIF13BQ9NQT8 1826 aa12.2□□□□□ -0.46
PHACTR4-204ENST00000493669 CACNB3P54284 484 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 KCNB1Q14721 858 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 CUL5Q93034 780 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 HERC5Q9UII4 1024 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 PPP1R3GB7ZBB8 358 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 EEF2P13639 858 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 ICA1Q05084 483 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 KARSQ15046 597 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 ZNF658Q5TYW1 1059 aaPredicted RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 MTRQ99707 1265 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 BIN2Q9UBW5 565 aaPredicted RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 RPN1P04843 607 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 COA7Q96BR5 231 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 CTAGE1Q96RT6 745 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 TDRD3Q9H7E2 651 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
PHACTR4-204ENST00000493669 ARFGEF1Q9Y6D6 1849 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 GCFC2P16383 781 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 SLC1A4P43007 532 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 ARID5BQ14865 1188 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 SLFN13Q68D06 897 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 PPP4R3AQ6IN85 833 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 CABP7Q86V35 215 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 IGSF22Q8N9C0 903 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 DPF2Q92785 391 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 MED15Q96RN5 788 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 RAB34Q9BZG1 259 aa12.18□□□□□ -0.46
PHACTR4-204ENST00000493669 TMEM266Q2M3C6 531 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms