RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 NOVP48745 357 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 TFAP4Q01664 338 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 C8orf34Q49A92 452 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 SNRNP48Q6IEG0 339 aaKnown RBP17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 SLC39A5Q6ZMH5 540 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 PRPF38AQ8NAV1 312 aaKnown RBP17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 CLIP2Q9UDT6 1046 aa17.65■□□□□ 0.42
CDC42SE1-205ENST00000491825 MYH4Q9Y623 1939 aa17.64■□□□□ 0.42
CDC42SE1-205ENST00000491825 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 RANBP6O60518 1105 aaKnown RBP17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 HSPA4P34932 840 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 TSGA10IPQ3SY00 556 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 C1orf53Q5VUE5 145 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 LRRC47Q8N1G4 583 aaKnown RBP17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 GMCL1P1Q8NEA9 526 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 KCNB2Q92953 911 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 TAF6LQ9Y6J9 622 aa17.64■□□□□ 0.41
CDC42SE1-205ENST00000491825 E7EWF7 191 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 TTLL1O95922 423 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 ADCYAP1R1P41586 468 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 TRDNQ13061 729 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 RRP12Q5JTH9 1297 aaKnown RBP17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 SLC38A10Q9HBR0 1119 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 XPNPEP3Q9NQH7 507 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 ATP11BQ9Y2G3 1177 aa17.63■□□□□ 0.41
CDC42SE1-205ENST00000491825 B4E1Z4 1266 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 KDM4AO75164 1064 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 RARBP10826 455 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 TRIM60Q495X7 471 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 MAMDC4Q6UXC1 1216 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 Q7L0L9 218 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 MSL3Q8N5Y2 521 aaKnown RBP17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 DEFB123Q8N688 67 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 LENG1Q96BZ8 264 aaPredicted RBP17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 FGD4Q96M96 766 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 USP26Q9BXU7 913 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 PDLIM7Q9NR12 457 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 IL17RBQ9NRM6 502 aa17.62■□□□□ 0.41
CDC42SE1-205ENST00000491825 LTBP2Q14767 1821 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 SNAI1O95863 264 aaPredicted RBP17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 AKR1A1P14550 325 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 KRT32Q14532 448 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 KIFC2Q96AC6 838 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 LBHD1Q9BQE6 289 aaPredicted RBP17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 FEM1BQ9UK73 627 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 SYNGAP1Q96PV0 1343 aa17.61■□□□□ 0.41
CDC42SE1-205ENST00000491825 ZBED4O75132 1171 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 PGK1P00558 417 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 MYCNP04198 464 aaPredicted RBP17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 OAZ1P54368 228 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 CCDC178Q5BJE1 867 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 ZNF467Q7Z7K2 595 aaPredicted RBP17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 MB21D2Q8IYB1 491 aaPredicted RBP17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 TTC14Q96N46 770 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 MTMR10Q9NXD2 777 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 ZSWIM5Q9P217 1185 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 PRKAG2Q9UGJ0 569 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 CNPY2Q9Y2B0 182 aa17.6■□□□□ 0.41
CDC42SE1-205ENST00000491825 NMT2O60551 498 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 BMP3P12645 472 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 MCCP23508 829 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 SH3RF1Q7Z6J0 888 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 RNF180Q86T96 592 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 DGKHQ86XP1 1220 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 RASEFQ8IZ41 740 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 GMCL1Q96IK5 515 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 STX8Q9UNK0 236 aa17.59■□□□□ 0.41
CDC42SE1-205ENST00000491825 CDH23Q9H251 3354 aa17.58■□□□□ 0.41
CDC42SE1-205ENST00000491825 ZNF536O15090 1300 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 WDR19Q8NEZ3 1342 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 SYNRGQ9UMZ2 1314 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 A0A1W2PQ45 241 aaPredicted RBP17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 A0A1W2PQY0 241 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 TRIM43BA6NCK2 446 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 CHST13Q8NET6 341 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 ANKS1AQ92625 1134 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 TRIM43Q96BQ3 446 aaPredicted RBP17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 DDX11Q96FC9 970 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 ZSCAN10Q96SZ4 725 aaPredicted RBP17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 UBAC1Q9BSL1 405 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 FBXO40Q9UH90 709 aa17.58■□□□□ 0.4
CDC42SE1-205ENST00000491825 PLXNA1Q9UIW2 1896 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 TNKSO95271 1327 aa17.57■□□□□ 0.4
CDC42SE1-205ENST00000491825 TMEM232C9JQI7 657 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms