RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 AGBL1Q96MI9 1066 aa18.02■□□□□ 0.48
VPS26A-207ENST00000490696 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
VPS26A-207ENST00000490696 ZNFX1Q9P2E3 1918 aaKnown RBP18.02■□□□□ 0.47
VPS26A-207ENST00000490696 RPTORQ8N122 1335 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 IFIT3O14879 490 aaKnown RBP18.01■□□□□ 0.47
VPS26A-207ENST00000490696 GOLGA8HP0CJ92 632 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 GJA8P48165 433 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 CACNB2Q08289 660 aaPredicted RBP18.01■□□□□ 0.47
VPS26A-207ENST00000490696 COL9A3Q14050 684 aaPredicted RBP18.01■□□□□ 0.47
VPS26A-207ENST00000490696 KCTD2Q14681 263 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 OLFML2BQ68BL8 750 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 CCDC174Q6PII3 467 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 CHST13Q8NET6 341 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 IGDCC4Q8TDY8 1250 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 SENP2Q9HC62 589 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 SLC5A4Q9NY91 659 aa18.01■□□□□ 0.47
VPS26A-207ENST00000490696 MKI67P46013 3256 aaKnown RBP18.01■□□□□ 0.47
VPS26A-207ENST00000490696 PGK2P07205 417 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
VPS26A-207ENST00000490696 ZNF792Q3KQV3 632 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 RNF20Q5VTR2 975 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 MFSD14CQ5VZR4 134 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 U2AF1L4Q8WU68 220 aaKnown RBP18■□□□□ 0.47
VPS26A-207ENST00000490696 MTA3Q9BTC8 594 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 XRN2Q9H0D6 950 aaKnown RBP eCLIP18■□□□□ 0.47
VPS26A-207ENST00000490696 HMX1Q9NP08 348 aaPredicted RBP18■□□□□ 0.47
VPS26A-207ENST00000490696 FBXO40Q9UH90 709 aa18■□□□□ 0.47
VPS26A-207ENST00000490696 DNAJC25-GNG10A0A024R161 153 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 ERICH2A1L162 156 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 ICAM1P05362 532 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 PARP1P09874 1014 aaKnown RBP17.99■□□□□ 0.47
VPS26A-207ENST00000490696 WTAPQ15007 396 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 TKFCQ3LXA3 575 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 TSGA10IPQ3SY00 556 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 TMEM67Q5HYA8 995 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 MAML3Q96JK9 1138 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 DEFB118Q96PH6 123 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 CPVLQ9H3G5 476 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 HOMER2Q9NSB8 354 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 RNF146Q9NTX7 359 aa17.99■□□□□ 0.47
VPS26A-207ENST00000490696 DIS3Q9Y2L1 958 aaKnown RBP17.99■□□□□ 0.47
VPS26A-207ENST00000490696 SMCHD1A6NHR9 2005 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 PRC1O43663 620 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 SGPL1O95470 568 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 ALAS1P13196 640 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 TAL1P17542 331 aaPredicted RBP17.98■□□□□ 0.47
VPS26A-207ENST00000490696 CYP2C19P33261 490 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 MCM5P33992 734 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 CRISPLD2Q9H0B8 497 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 ACAD9Q9H845 621 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 GPHNQ9NQX3 736 aaPredicted RBP17.98■□□□□ 0.47
VPS26A-207ENST00000490696 CCPG1Q9ULG6 757 aa17.98■□□□□ 0.47
VPS26A-207ENST00000490696 CCND3P30281 292 aaPredicted RBP17.97■□□□□ 0.47
VPS26A-207ENST00000490696 TROAPQ12815 778 aa17.97■□□□□ 0.47
VPS26A-207ENST00000490696 STAG2Q8N3U4 1231 aa17.97■□□□□ 0.47
VPS26A-207ENST00000490696 KCNB2Q92953 911 aa17.97■□□□□ 0.47
VPS26A-207ENST00000490696 TRERF1Q96PN7 1200 aa17.97■□□□□ 0.47
VPS26A-207ENST00000490696 MAD2L2Q9UI95 211 aa17.97■□□□□ 0.47
VPS26A-207ENST00000490696 PALM3A6NDB9 673 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-207ENST00000490696 SH2B2O14492 632 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-207ENST00000490696 REC8O95072 547 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 CYBAP13498 195 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 GRM4Q14833 912 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 ADGRF4Q8IZF3 695 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 TRPV1Q8NER1 839 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 TMEM87BQ96K49 555 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
VPS26A-207ENST00000490696 PLXNA1Q9UIW2 1896 aa17.96■□□□□ 0.47
VPS26A-207ENST00000490696 WDR19Q8NEZ3 1342 aa17.96■□□□□ 0.46
VPS26A-207ENST00000490696 CAPN2P17655 700 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 HSPA4P34932 840 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 ADCK5Q3MIX3 580 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 UBE2Q1Q7Z7E8 422 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 FGD4Q96M96 766 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 TINF2Q9BSI4 451 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 PNMA2Q9UL42 364 aa17.95■□□□□ 0.46
VPS26A-207ENST00000490696 KLRF2D3W0D1 207 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 LIFRP42702 1097 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 KRT32Q14532 448 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 CDC37Q16543 378 aaPredicted RBP17.94■□□□□ 0.46
VPS26A-207ENST00000490696 CATIPQ7Z7H3 387 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 ZNF467Q7Z7K2 595 aaPredicted RBP17.94■□□□□ 0.46
VPS26A-207ENST00000490696 MSL3Q8N5Y2 521 aaKnown RBP17.94■□□□□ 0.46
VPS26A-207ENST00000490696 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 JMJD4Q9H9V9 463 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 PFASO15067 1338 aa17.94■□□□□ 0.46
VPS26A-207ENST00000490696 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
VPS26A-207ENST00000490696 TFRCP02786 760 aaKnown RBP17.93■□□□□ 0.46
VPS26A-207ENST00000490696 EXOSC10Q01780 885 aaKnown RBP17.93■□□□□ 0.46
VPS26A-207ENST00000490696 SLC35G1Q2M3R5 365 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms