RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 CASC1Q6TDU7 716 aa22.42■■□□□ 1.18
EPHB4-207ENST00000489808 UBE2Q1Q7Z7E8 422 aa22.42■■□□□ 1.18
EPHB4-207ENST00000489808 DDX11Q96FC9 970 aa22.42■■□□□ 1.18
EPHB4-207ENST00000489808 RANBP17Q9H2T7 1088 aaKnown RBP22.42■■□□□ 1.18
EPHB4-207ENST00000489808 ANO2Q9NQ90 1003 aa22.42■■□□□ 1.18
EPHB4-207ENST00000489808 PARP14Q460N5 1801 aa22.42■■□□□ 1.18
EPHB4-207ENST00000489808 NECTIN1Q15223 517 aa22.41■■□□□ 1.18
EPHB4-207ENST00000489808 GPATCH4Q5T3I0 446 aaKnown RBP22.41■■□□□ 1.18
EPHB4-207ENST00000489808 RALYLQ86SE5 291 aaKnown RBP22.41■■□□□ 1.18
EPHB4-207ENST00000489808 DNAJC25-GNG10A0A024R161 153 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 SLC27A2O14975 620 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 GOLGA8HP0CJ92 632 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 LHX8Q68G74 356 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 ANKRD35Q8N283 1001 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 TRPV1Q8NER1 839 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 TRERF1Q96PN7 1200 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 HOMER2Q9NSB8 354 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 OGDHLQ9ULD0 1010 aa22.4■■□□□ 1.18
EPHB4-207ENST00000489808 IFIT3O14879 490 aaKnown RBP22.39■■□□□ 1.17
EPHB4-207ENST00000489808 ICAM1P05362 532 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 ALAS1P13196 640 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 CREB3L3Q68CJ9 461 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 TINF2Q9BSI4 451 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 UBA5Q9GZZ9 404 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 ACAD9Q9H845 621 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 RNF146Q9NTX7 359 aa22.39■■□□□ 1.17
EPHB4-207ENST00000489808 RBBP6Q7Z6E9 1792 aaKnown RBP22.39■■□□□ 1.17
EPHB4-207ENST00000489808 FARP2O94887 1054 aaPredicted RBP22.38■■□□□ 1.17
EPHB4-207ENST00000489808 CYBAP13498 195 aa22.38■■□□□ 1.17
EPHB4-207ENST00000489808 CNGA1P29973 690 aa22.38■■□□□ 1.17
EPHB4-207ENST00000489808 PRAMEF19Q5SWL8 479 aa22.38■■□□□ 1.17
EPHB4-207ENST00000489808 CHST3Q7LGC8 479 aa22.38■■□□□ 1.17
EPHB4-207ENST00000489808 MB21D2Q8IYB1 491 aaPredicted RBP22.38■■□□□ 1.17
EPHB4-207ENST00000489808 CCPG1Q9ULG6 757 aa22.38■■□□□ 1.17
EPHB4-207ENST00000489808 LAMA4Q16363 1823 aa22.38■■□□□ 1.17
EPHB4-207ENST00000489808 COL11A1P12107 1806 aaPredicted RBP22.37■■□□□ 1.17
EPHB4-207ENST00000489808 ERICH2A1L162 156 aa22.37■■□□□ 1.17
EPHB4-207ENST00000489808 ASPRV1Q53RT3 343 aa22.37■■□□□ 1.17
EPHB4-207ENST00000489808 ANKLE1Q8NAG6 615 aa22.37■■□□□ 1.17
EPHB4-207ENST00000489808 IGDCC4Q8TDY8 1250 aa22.37■■□□□ 1.17
EPHB4-207ENST00000489808 PARP1P09874 1014 aaKnown RBP22.36■■□□□ 1.17
EPHB4-207ENST00000489808 ANTXR2P58335 489 aa22.36■■□□□ 1.17
EPHB4-207ENST00000489808 SART3Q15020 963 aaKnown RBP22.36■■□□□ 1.17
EPHB4-207ENST00000489808 MUM1L1Q5H9M0 696 aa22.36■■□□□ 1.17
EPHB4-207ENST00000489808 MSL3Q8N5Y2 521 aaKnown RBP22.36■■□□□ 1.17
EPHB4-207ENST00000489808 CPVLQ9H3G5 476 aa22.36■■□□□ 1.17
EPHB4-207ENST00000489808 SENP2Q9HC62 589 aa22.36■■□□□ 1.17
EPHB4-207ENST00000489808 DDX20Q9UHI6 824 aaKnown RBP22.36■■□□□ 1.17
EPHB4-207ENST00000489808 NRBP1Q9UHY1 535 aa22.36■■□□□ 1.17
EPHB4-207ENST00000489808 PNMA2Q9UL42 364 aa22.36■■□□□ 1.17
EPHB4-207ENST00000489808 TNRC18O15417 2968 aaPredicted RBP22.35■■□□□ 1.17
EPHB4-207ENST00000489808 MSCO60682 206 aa22.35■■□□□ 1.17
EPHB4-207ENST00000489808 MNX1P50219 401 aaPredicted RBP22.35■■□□□ 1.17
EPHB4-207ENST00000489808 WTAPQ15007 396 aa22.35■■□□□ 1.17
EPHB4-207ENST00000489808 TMEM67Q5HYA8 995 aa22.35■■□□□ 1.17
EPHB4-207ENST00000489808 MAMDC4Q6UXC1 1216 aa22.35■■□□□ 1.17
EPHB4-207ENST00000489808 ZNF467Q7Z7K2 595 aaPredicted RBP22.35■■□□□ 1.17
EPHB4-207ENST00000489808 PAWRQ96IZ0 340 aaKnown RBP22.35■■□□□ 1.17
EPHB4-207ENST00000489808 A1CFQ9NQ94 594 aaKnown RBP22.35■■□□□ 1.17
EPHB4-207ENST00000489808 ZNF236Q9UL36 1845 aa22.35■■□□□ 1.17
EPHB4-207ENST00000489808 POTEB2H3BUK9 544 aa22.34■■□□□ 1.17
EPHB4-207ENST00000489808 SEPT4O43236 478 aa22.34■■□□□ 1.17
EPHB4-207ENST00000489808 TAL1P17542 331 aaPredicted RBP22.34■■□□□ 1.17
EPHB4-207ENST00000489808 RNF20Q5VTR2 975 aa22.34■■□□□ 1.17
EPHB4-207ENST00000489808 ADGRF4Q8IZF3 695 aa22.34■■□□□ 1.17
EPHB4-207ENST00000489808 FGD4Q96M96 766 aa22.34■■□□□ 1.17
EPHB4-207ENST00000489808 MTA3Q9BTC8 594 aa22.34■■□□□ 1.17
EPHB4-207ENST00000489808 SNAI1O95863 264 aaPredicted RBP22.33■■□□□ 1.17
EPHB4-207ENST00000489808 CNTN2Q02246 1040 aa22.33■■□□□ 1.17
EPHB4-207ENST00000489808 NECAB2Q7Z6G3 386 aa22.33■■□□□ 1.17
EPHB4-207ENST00000489808 STAG2Q8N3U4 1231 aa22.33■■□□□ 1.17
EPHB4-207ENST00000489808 FAM133AQ8N9E0 248 aa22.33■■□□□ 1.17
EPHB4-207ENST00000489808 DIS3LQ8TF46 1054 aaKnown RBP22.33■■□□□ 1.17
EPHB4-207ENST00000489808 CYP39A1Q9NYL5 469 aa22.33■■□□□ 1.17
EPHB4-207ENST00000489808 MAD2L2Q9UI95 211 aa22.33■■□□□ 1.17
EPHB4-207ENST00000489808 PFASO15067 1338 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 WDR19Q8NEZ3 1342 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 SYNGAP1Q96PV0 1343 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 PALM3A6NDB9 673 aaPredicted RBP22.32■■□□□ 1.16
EPHB4-207ENST00000489808 PRC1O43663 620 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 MCM5P33992 734 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 TROAPQ12815 778 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 COL9A3Q14050 684 aaPredicted RBP22.32■■□□□ 1.16
EPHB4-207ENST00000489808 CLEC4DQ8WXI8 215 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 JMJD4Q9H9V9 463 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 VAT1LQ9HCJ6 419 aa22.32■■□□□ 1.16
EPHB4-207ENST00000489808 SOWAHBA6NEL2 793 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 KLRF2D3W0D1 207 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 ZNF865P0CJ78 1059 aaPredicted RBP22.31■■□□□ 1.16
EPHB4-207ENST00000489808 TSGA10IPQ3SY00 556 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 NSMFQ6X4W1 530 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 TMTC2Q8N394 836 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 HTATIP2Q9BUP3 242 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 LY9Q9HBG7 655 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 GPHNQ9NQX3 736 aaPredicted RBP22.31■■□□□ 1.16
EPHB4-207ENST00000489808 CNPY2Q9Y2B0 182 aa22.31■■□□□ 1.16
EPHB4-207ENST00000489808 GRM4Q14833 912 aa22.3■■□□□ 1.16
EPHB4-207ENST00000489808 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
EPHB4-207ENST00000489808 ANO1Q5XXA6 986 aa22.3■■□□□ 1.16
EPHB4-207ENST00000489808 CATIPQ7Z7H3 387 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms