RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 A0A1W2PPC1 479 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 ZNF213O14771 459 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 ALAS1P13196 640 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 PDE4AP27815 886 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 SLC16A2P36021 539 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 RTP1P59025 263 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 MDM2Q00987 491 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 MAMDC4Q6UXC1 1216 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 SLC39A5Q6ZMH5 540 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 MSL3Q8N5Y2 521 aaKnown RBP14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 DCAF4Q8WV16 495 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 FGD4Q96M96 766 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 RNF146Q9NTX7 359 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 ZHX1Q9UKY1 873 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 ATP11BQ9Y2G3 1177 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 ZMYM6O95789 1325 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 SYNGAP1Q96PV0 1343 aa14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 COL11A1P12107 1806 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-215ENST00000488920 HIP1O00291 1037 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 SOX1O00570 391 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 AKR1A1P14550 325 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 RNF180Q86T96 592 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 TRERF1Q96PN7 1200 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 UBE2OQ9C0C9 1292 aaKnown RBP14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 FRMPD2Q68DX3 1309 aaPredicted RBP14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 ALPK3Q96L96 1907 aa14.07□□□□□ -0.16
CCHCR1-215ENST00000488920 POTEB2H3BUK9 544 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 PCP11498 1178 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 ACVR2BQ13705 512 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 TRIM60Q495X7 471 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 MUM1L1Q5H9M0 696 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 TTC14Q96N46 770 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 ZKSCAN3Q9BRR0 538 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 A1CFQ9NQ94 594 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 CCPG1Q9ULG6 757 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 PHF24Q9UPV7 400 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 NEDD4P46934 1319 aa14.06□□□□□ -0.16
CCHCR1-215ENST00000488920 MYH4Q9Y623 1939 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 SOWAHBA6NEL2 793 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 SYDE2Q5VT97 1194 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 BTNL9Q6UXG8 535 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 ARMCX2Q7L311 632 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 CCDC144CPQ8IYA2 1237 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 FAM133AQ8N9E0 248 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 ESR2Q92731 530 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 LBHD1Q9BQE6 289 aaPredicted RBP14.05□□□□□ -0.16
CCHCR1-215ENST00000488920 ADAMTS4O75173 837 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 ICAM1P05362 532 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 PDHBP11177 359 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 CCDC144BQ3MJ40 725 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 DSCC1Q9BVC3 393 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 IL25Q9H293 177 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 RANBP17Q9H2T7 1088 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 ABHD16BQ9H3Z7 469 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 PRKAG2Q9UGJ0 569 aa14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 DDX49Q9Y6V7 483 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-215ENST00000488920 ZNFX1Q9P2E3 1918 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 SZT2Q5T011 3432 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 A0A1W2PQ45 241 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 A0A1W2PQY0 241 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 B4E1Z4 1266 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 ADCY6O43306 1168 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 KDM4AO75164 1064 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 DUSP11O75319 330 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 TLE2Q04725 743 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 SNX17Q15036 470 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 KCNA10Q16322 511 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 NSMFQ6X4W1 530 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 TDHQ8IZJ6 230 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 PURBQ96QR8 312 aaKnown RBP14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 CTNNA3Q9UI47 895 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 SYNRGQ9UMZ2 1314 aa14.03□□□□□ -0.16
CCHCR1-215ENST00000488920 MYADML2A6NDP7 307 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 GOLGA8HP0CJ92 632 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 ACLYP53396 1101 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 C1orf53Q5VUE5 145 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 DGKHQ86XP1 1220 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 TSEN34Q9BSV6 310 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 KATNBL1Q9H079 304 aa14.02□□□□□ -0.17
CCHCR1-215ENST00000488920 ZSWIM5Q9P217 1185 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms