RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KCNG4Q8TDN1 519 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 HOOK2Q96ED9 719 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.61□□□□□ -0.07
NELFE-209ENST00000488426 SYNPO2Q9UMS6 1093 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 USP17L5A8MUK1 530 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 CYTH3O43739 400 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 CEBPZQ03701 1054 aaKnown RBP14.61□□□□□ -0.07
NELFE-209ENST00000488426 PPATQ06203 517 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 NOM1Q5C9Z4 860 aaKnown RBP14.61□□□□□ -0.07
NELFE-209ENST00000488426 GPATCH4Q5T3I0 446 aaKnown RBP14.61□□□□□ -0.07
NELFE-209ENST00000488426 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 USP17L2Q6R6M4 530 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 LINC00301Q8NCQ3 95 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 SHISA4Q96DD7 197 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
NELFE-209ENST00000488426 CABP5Q9NP86 173 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 MTMR7Q9Y216 660 aa14.61□□□□□ -0.07
NELFE-209ENST00000488426 BAZ2BQ9UIF8 2168 aaKnown RBP14.6□□□□□ -0.07
NELFE-209ENST00000488426 CALML3P27482 149 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 ICA1Q05084 483 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 STK38Q15208 465 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 SLC35G1Q2M3R5 365 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 CCDC183Q5T5S1 534 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 CLEC10AQ8IUN9 316 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 PGBD1Q96JS3 809 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 ZHX2Q9Y6X8 837 aa14.6□□□□□ -0.07
NELFE-209ENST00000488426 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 GOLGA8HP0CJ92 632 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 EEF2P13639 858 aaKnown RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 JAG1P78504 1218 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 ZNF543Q08ER8 600 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 SNAPC2Q13487 334 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 SEPT2Q15019 361 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 SHROOM1Q2M3G4 852 aaPredicted RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 NOL9Q5SY16 702 aaKnown RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 CCDC148Q8NFR7 591 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 CD99L2Q8TCZ2 262 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 RRP36Q96EU6 259 aaKnown RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 RIOX1Q9H6W3 641 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 LETM1O95202 739 aaPredicted RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 CETPP11597 493 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 PTPRAP18433 802 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 NLRP5P59047 1200 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 ATP2B2Q01814 1243 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 TAF1CQ15572 869 aaPredicted RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 NPY5RQ15761 445 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 GALNT17Q6IS24 598 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
NELFE-209ENST00000488426 BICD2Q8TD16 824 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 DCAF4Q8WV16 495 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 KCNH4Q9UQ05 1017 aa14.59□□□□□ -0.07
NELFE-209ENST00000488426 FSD2A1L4K1 749 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 SPTLC2O15270 562 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 GDF11O95390 407 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 GH2P01242 217 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 ME1P48163 572 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 NR5A1Q13285 461 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 SLC39A14Q15043 492 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 SF3A1Q15459 793 aaKnown RBP14.58□□□□□ -0.08
NELFE-209ENST00000488426 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 SCYL3Q8IZE3 742 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 OXER1Q8TDS5 423 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 CCDC12Q8WUD4 166 aaPredicted RBP14.58□□□□□ -0.08
NELFE-209ENST00000488426 BARHL2Q9NY43 387 aa14.58□□□□□ -0.08
NELFE-209ENST00000488426 SEC63Q9UGP8 760 aaKnown RBP14.58□□□□□ -0.08
NELFE-209ENST00000488426 A0A1W2PQ27 194 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 A0A1W2PQ64 194 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 A0A1W2PQD8 194 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 GOLGA6L3A6NEY3 463 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 DAGLBQ8NCG7 672 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 PIBF1Q8WXW3 757 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 TNFRSF25Q93038 417 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
NELFE-209ENST00000488426 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 TRIM17Q9Y577 477 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 TNRC18O15417 2968 aaPredicted RBP14.57□□□□□ -0.08
NELFE-209ENST00000488426 STXBP3O00186 592 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 PPP6R2O75170 966 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 SOX10P56693 466 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 SP3Q02447 781 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 FRMPD2Q68DX3 1309 aaPredicted RBP14.57□□□□□ -0.08
NELFE-209ENST00000488426 WWC2Q6AWC2 1192 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 ADALQ6DHV7 355 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 HEATR3Q7Z4Q2 680 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 SIAH1Q8IUQ4 282 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 PKNOX2Q96KN3 472 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
NELFE-209ENST00000488426 CTNND1O60716 968 aaKnown RBP14.56□□□□□ -0.08
NELFE-209ENST00000488426 LIG1P18858 919 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 CTGFP29279 349 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 TOB1P50616 345 aaPredicted RBP14.56□□□□□ -0.08
NELFE-209ENST00000488426 PTPAQ15257 358 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 CCDC96Q2M329 555 aa14.56□□□□□ -0.08
NELFE-209ENST00000488426 GPKOWQ92917 476 aaPredicted RBP eCLIP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms