RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 MMP19Q99542 508 aa18.72■□□□□ 0.59
ERGIC3-216ENST00000488384 MTA3Q9BTC8 594 aa18.72■□□□□ 0.59
ERGIC3-216ENST00000488384 SLC34A2O95436 690 aa18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 PARP1P09874 1014 aaKnown RBP18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 TAL1P17542 331 aaPredicted RBP18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 EN2P19622 333 aaPredicted RBP18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 SLC4A3P48751 1232 aa18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 TRMT44Q8IYL2 757 aaKnown RBP18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 FLRT1Q9NZU1 646 aa18.71■□□□□ 0.59
ERGIC3-216ENST00000488384 EPB41L2O43491 1005 aaKnown RBP18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 CCL5P13501 91 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 TROAPQ12815 778 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 KRT32Q14532 448 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 KCTD2Q14681 263 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 GRM4Q14833 912 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 MAP3K21Q5TCX8 1036 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 PRPF38BQ5VTL8 546 aaKnown RBP18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 STAG2Q8N3U4 1231 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 TMEM87BQ96K49 555 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 LRRC2Q9BYS8 371 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 UBA5Q9GZZ9 404 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 UNC93B1Q9H1C4 597 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 HOMER2Q9NSB8 354 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 RNF146Q9NTX7 359 aa18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 ZNFX1Q9P2E3 1918 aaKnown RBP18.7■□□□□ 0.58
ERGIC3-216ENST00000488384 PLXNA1Q9UIW2 1896 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 IGHA2P01877 340 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 ICAM1P05362 532 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 PGK2P07205 417 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 DPP9Q86TI2 863 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 CHST13Q8NET6 341 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 FBXO40Q9UH90 709 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 MAD2L2Q9UI95 211 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 CCPG1Q9ULG6 757 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 SNX14Q9Y5W7 946 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 WDR19Q8NEZ3 1342 aa18.69■□□□□ 0.58
ERGIC3-216ENST00000488384 SMCHD1A6NHR9 2005 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 PALM3A6NDB9 673 aaPredicted RBP18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 ALAS1P13196 640 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 PRKAR2AP13861 404 aaKnown RBP18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 EXOSC10Q01780 885 aaKnown RBP18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 TKFCQ3LXA3 575 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 CATIPQ7Z7H3 387 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 ZNF654Q8IZM8 581 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 TCEANC2Q96MN5 208 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 TMEM106CQ9BVX2 250 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 RNF208Q9H0X6 261 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 ACAD9Q9H845 621 aa18.68■□□□□ 0.58
ERGIC3-216ENST00000488384 DNAJC25-GNG10A0A024R161 153 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 DDAH1O94760 285 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 LIFRP42702 1097 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 CDC37Q16543 378 aaPredicted RBP18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 ZNF792Q3KQV3 632 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 MUM1L1Q5H9M0 696 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 OLFML2BQ68BL8 750 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 DHX32Q7L7V1 743 aaKnown RBP18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 SHISA4Q96DD7 197 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 MAML3Q96JK9 1138 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 TRERF1Q96PN7 1200 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 MYL10Q9BUA6 226 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 USP26Q9BXU7 913 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 PAK6Q9NQU5 681 aaPredicted RBP18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 SLC5A4Q9NY91 659 aa18.67■□□□□ 0.58
ERGIC3-216ENST00000488384 KLRF2D3W0D1 207 aa18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 CACNB2Q08289 660 aaPredicted RBP18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 NFXL1Q6ZNB6 911 aa18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 SGMS1Q86VZ5 419 aa18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 JAKMIP1Q96N16 626 aaKnown RBP18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.66■□□□□ 0.589e-6■■□□□ 13.2
ERGIC3-216ENST00000488384 JMJD4Q9H9V9 463 aa18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 A1CFQ9NQ94 594 aaKnown RBP18.66■□□□□ 0.58
ERGIC3-216ENST00000488384 LCTP09848 1927 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 CCDC69A6NI79 296 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 GJB1P08034 283 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 HMGB1P09429 215 aaKnown RBP18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 CPA1P15085 419 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 CYP2C19P33261 490 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 MFSD14CQ5VZR4 134 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 ANKRD35Q8N283 1001 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 TMTC2Q8N394 836 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 DDX11Q96FC9 970 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 FGD4Q96M96 766 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 RPTORQ8N122 1335 aa18.65■□□□□ 0.58
ERGIC3-216ENST00000488384 DHX16O60231 1041 aaKnown RBP18.64■□□□□ 0.57
ERGIC3-216ENST00000488384 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
ERGIC3-216ENST00000488384 MTMR8Q96EF0 704 aa18.64■□□□□ 0.57
ERGIC3-216ENST00000488384 MAP3K14Q99558 947 aa18.64■□□□□ 0.57
ERGIC3-216ENST00000488384 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
ERGIC3-216ENST00000488384 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
ERGIC3-216ENST00000488384 FRMPD3Q5JV73 1810 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 MYH6P13533 1939 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 NFIBO00712 420 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 CYTH3O43739 400 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 CYBAP13498 195 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms