RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 MSCO60682 206 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 ALAS1P13196 640 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 MTFR1Q15390 333 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 OLFML2BQ68BL8 750 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 SYNE3Q6ZMZ3 975 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 REPS2Q8NFH8 660 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 USP6NLQ92738 828 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 TMEM87BQ96K49 555 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 MPHOSPH6Q99547 160 aaKnown RBP10.92□□□□□ -0.66
LCN2-205ENST00000487719 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.92□□□□□ -0.66
LCN2-205ENST00000487719 UNC93B1Q9H1C4 597 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 RNF146Q9NTX7 359 aa10.92□□□□□ -0.66
LCN2-205ENST00000487719 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
LCN2-205ENST00000487719 EPB41L2O43491 1005 aaKnown RBP10.91□□□□□ -0.66
LCN2-205ENST00000487719 PRC1O43663 620 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 TFRCP02786 760 aaKnown RBP10.91□□□□□ -0.66
LCN2-205ENST00000487719 ICAM1P05362 532 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 CALM1P0DP23 149 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 CALM2P0DP24 149 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 CALM3P0DP25 149 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 SNHG28P0DPA3 235 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 CNGA1P29973 690 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 KIF5BP33176 963 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 SLC16A2P36021 539 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 GJA8P48165 433 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 RGS19P49795 217 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 NECTIN1Q15223 517 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 CYB5R4Q7L1T6 521 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 MB21D2Q8IYB1 491 aaPredicted RBP10.91□□□□□ -0.66
LCN2-205ENST00000487719 MSL3Q8N5Y2 521 aaKnown RBP10.91□□□□□ -0.66
LCN2-205ENST00000487719 CTCFLQ8NI51 663 aaPredicted RBP10.91□□□□□ -0.66
LCN2-205ENST00000487719 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 RANBP17Q9H2T7 1088 aaKnown RBP10.91□□□□□ -0.66
LCN2-205ENST00000487719 CNPY2Q9Y2B0 182 aa10.91□□□□□ -0.66
LCN2-205ENST00000487719 BRCA2P51587 3418 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 WDR19Q8NEZ3 1342 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 KIAA1217Q5T5P2 1943 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 B4DLN1 442 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 DDAH1O94760 285 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 SGPL1O95470 568 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 GOLGA8HP0CJ92 632 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 PSMA5P28066 241 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 GNAQP50148 359 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 MRPL12P52815 198 aaKnown RBP10.9□□□□□ -0.66
LCN2-205ENST00000487719 SEC23AQ15436 765 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 TTBK2Q6IQ55 1244 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 CHST3Q7LGC8 479 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 U2AF1L4Q8WU68 220 aaKnown RBP10.9□□□□□ -0.66
LCN2-205ENST00000487719 NUP133Q8WUM0 1156 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 DEFB118Q96PH6 123 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 NEK1Q96PY6 1258 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 NRBP1Q9UHY1 535 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 SLC12A7Q9Y666 1083 aa10.9□□□□□ -0.66
LCN2-205ENST00000487719 LCTP09848 1927 aa10.9□□□□□ -0.67
LCN2-205ENST00000487719 CEP290O15078 2479 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 KLRF2D3W0D1 207 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 POTEB2H3BUK9 544 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 PGK2P07205 417 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
LCN2-205ENST00000487719 LIFRP42702 1097 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 CACNB2Q08289 660 aaPredicted RBP10.89□□□□□ -0.67
LCN2-205ENST00000487719 CDC37Q16543 378 aaPredicted RBP10.89□□□□□ -0.67
LCN2-205ENST00000487719 CCL14Q16627 93 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 NSMFQ6X4W1 530 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 STOX1Q6ZVD7 989 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
LCN2-205ENST00000487719 RASGRP2Q7LDG7 609 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 NPLOC4Q8TAT6 608 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 MAML3Q96JK9 1138 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 TINF2Q9BSI4 451 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 HTATIP2Q9BUP3 242 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 PAK6Q9NQU5 681 aaPredicted RBP10.89□□□□□ -0.67
LCN2-205ENST00000487719 ADD3Q9UEY8 706 aaKnown RBP10.89□□□□□ -0.67
LCN2-205ENST00000487719 RIPK3Q9Y572 518 aa10.89□□□□□ -0.67
LCN2-205ENST00000487719 ABCB11O95342 1321 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 SYNGAP1Q96PV0 1343 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 PTPDC1A2A3K4 754 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 ASB14A6NK59 587 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 COBLO75128 1261 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 FARP2O94887 1054 aaPredicted RBP10.88□□□□□ -0.67
LCN2-205ENST00000487719 GRM4Q14833 912 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 TSGA10IPQ3SY00 556 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 USH1GQ495M9 461 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 MAP3K21Q5TCX8 1036 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 DHX32Q7L7V1 743 aaKnown RBP10.88□□□□□ -0.67
LCN2-205ENST00000487719 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
LCN2-205ENST00000487719 FBXO11Q86XK2 927 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 MCF2L2Q86YR7 1114 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 ADGRF4Q8IZF3 695 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 MAP3K14Q99558 947 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
LCN2-205ENST00000487719 MAF1Q9H063 256 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms