RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
TRA2B-214ENST00000487615 PCDHA1Q9Y5I3 950 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 CHMP2AO43633 222 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 CCDC174Q6PII3 467 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-214ENST00000487615 MROH7-TTC4A0A0A0MT08 1334 aa13.16□□□□□ -0.3
TRA2B-214ENST00000487615 CFBP00751 764 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 PRPF4BQ13523 1007 aaKnown RBP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 NELFCDQ8IXH7 590 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 ENGASEQ8NFI3 743 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 COBLO75128 1261 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 MYOCDQ8IZQ8 938 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 SLC39A2Q9NP94 309 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 EEF1GP26641 437 aaKnown RBP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 SLC9C1Q4G0N8 1177 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 FBXO33Q7Z6M2 555 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 USP37Q86T82 979 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 DHTKD1Q96HY7 919 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-214ENST00000487615 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 DISC1Q9NRI5 854 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 RWDD2AQ9UIY3 292 aa13.15□□□□□ -0.3
TRA2B-214ENST00000487615 VWA3BQ502W6 1294 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
TRA2B-214ENST00000487615 EEF2KMTQ96G04 330 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 FBXO2Q9UK22 296 aaPredicted RBP13.14□□□□□ -0.31
TRA2B-214ENST00000487615 NALCNQ8IZF0 1738 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 H0YHG0 523 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 IGSF3O75054 1194 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 SSR1P43307 286 aaKnown RBP13.14□□□□□ -0.31
TRA2B-214ENST00000487615 LMAN1P49257 510 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 SECISBP2LQ93073 1101 aaKnown RBP13.14□□□□□ -0.31
TRA2B-214ENST00000487615 COA7Q96BR5 231 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 SELENOOQ9BVL4 669 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 DBNDD1Q9H9R9 158 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 JCADQ9P266 1359 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 CETN2P41208 172 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 MAGEA1P43355 309 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
TRA2B-214ENST00000487615 GPBP1Q86WP2 473 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 RGS22Q8NE09 1264 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 TUBGCP2Q9BSJ2 902 aa13.14□□□□□ -0.31
TRA2B-214ENST00000487615 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
TRA2B-214ENST00000487615 CALUO43852 315 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 NPR1P16066 1061 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 GRM4Q14833 912 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 PRR16Q569H4 304 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 LMBR1Q8WVP7 490 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 RBL2Q08999 1139 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 FAM26FQ5R3K3 315 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 SLFN12Q8IYM2 578 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 SRBD1Q8N5C6 995 aaKnown RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 BICD1Q96G01 975 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 KANSL2Q9H9L4 492 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 AFF2P51816 1311 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 GCFC2P16383 781 aaKnown RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 ABCB5Q2M3G0 1257 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 AMNQ9BXJ7 453 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 PKD2L1Q9P0L9 805 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 FRMD4BQ9Y2L6 1034 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 EFCAB8A8MWE9 144 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 FOXN1O15353 648 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 PLCG1P19174 1290 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 CASP1P29466 404 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 RBM43Q6ZSC3 357 aaKnown RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 P2RX5Q93086 422 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 KCNF1Q9H3M0 494 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 ZBTB21Q9ULJ3 1066 aa13.13□□□□□ -0.31
TRA2B-214ENST00000487615 EPN1Q9Y6I3 576 aaPredicted RBP13.13□□□□□ -0.31
TRA2B-214ENST00000487615 WDR78Q5VTH9 848 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 RRAGAQ7L523 313 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 ANAPC4Q9UJX5 808 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 GNA14O95837 355 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 SLC16A2P36021 539 aa13.12□□□□□ -0.31
TRA2B-214ENST00000487615 ATP2C1P98194 919 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms