RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 PGAP2Q9UHJ9 254 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 COL4A5P29400 1685 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 LAMB4A4D0S4 1761 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 CA12O43570 354 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 EIF6P56537 245 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 NLRP12P59046 1061 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 C19orf57Q0VDD7 668 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 DSC3Q14574 896 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 TAF7Q15545 349 aaPredicted RBP6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 HLFQ16534 295 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 DUOXA2Q1HG44 320 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 SPRED3Q2MJR0 410 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 CST9Q5W186 159 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 OLFM4Q6UX06 510 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 RTF1Q92541 710 aaKnown RBP6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 CFAP53Q96M91 514 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 NUDCQ9Y266 331 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 CDHR2Q9BYE9 1310 aa6.75□□□□□ -1.33
R3HDM1-218ENST00000487294 ABCC12Q96J65 1359 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 GSC2O15499 205 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 PIP4K2AP48426 406 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 ARL4DP49703 201 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 SLC10A5Q5PT55 438 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 ZNF34Q8IZ26 560 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 EPS8L3Q8TE67 593 aaKnown RBP6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 CAPNS2Q96L46 248 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 UBL7Q96S82 380 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 RTFDC1Q9BY42 306 aaPredicted RBP6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 PCGF6Q9BYE7 350 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 EHD4Q9H223 541 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 TRPM7Q96QT4 1865 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 MAP3K15Q6ZN16 1313 aa6.74□□□□□ -1.33
R3HDM1-218ENST00000487294 NUP98P52948 1817 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 KDM3BQ7LBC6 1761 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 TREHO43280 583 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 PAX4O43316 350 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 GLB1P16278 677 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 EPS15P42566 896 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 CD97P48960 835 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 PLCB3Q01970 1234 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 ZNF423Q2M1K9 1284 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 MCM10Q7L590 875 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 SAPCD2Q86UD0 394 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 PNISRQ8TF01 805 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 CLEC4MQ9H2X3 399 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 SOX17Q9H6I2 414 aaPredicted RBP6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 ADARB2Q9NS39 739 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 GPRC5DQ9NZD1 345 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 ABT1Q9ULW3 272 aaKnown RBP6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 UBN2Q6ZU65 1347 aa6.73□□□□□ -1.33
R3HDM1-218ENST00000487294 NTSR2O95665 410 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 U2AF1L5P0DN76 240 aaPredicted RBP6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 PDIA4P13667 645 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 ITPKAP23677 461 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 PPP2R1AP30153 589 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 EIF4A1P60842 406 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 U2AF1Q01081 240 aaKnown RBP eCLIP6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 PCDH1Q08174 1060 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 PARP10Q53GL7 1025 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 PI16Q6UXB8 463 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 LRP10Q7Z4F1 713 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 RPGRQ92834 1020 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 RBM17Q96I25 401 aaKnown RBP6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 ZNRF3Q9ULT6 936 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 ATP6V0A2Q9Y487 856 aa6.72□□□□□ -1.33
R3HDM1-218ENST00000487294 PATL2C9JE40 543 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 GADD45BO75293 160 aaPredicted RBP6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 BBOX1O75936 387 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 CXCL9Q07325 125 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 DCTN1Q14203 1278 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 GRM2Q14416 872 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 ENOX2Q16206 610 aaKnown RBP6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 SUSD4Q5VX71 490 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 CYP4F22Q6NT55 531 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 KIF6Q6ZMV9 814 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 TTLL7Q6ZT98 887 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 SP8Q8IXZ3 490 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 NIM1KQ8IY84 436 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 SUPT20HQ8NEM7 779 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 ASB16Q96NS5 453 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 ZNF576Q9H609 170 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
R3HDM1-218ENST00000487294 PNMA6FA0A0J9YX94 578 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 TRAF5O00463 557 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 PPIP5K2O43314 1243 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 DLGAP3O95886 979 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 SSTR4P31391 388 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 GSTM4Q03013 218 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 FMR1Q06787 632 aaKnown RBP eCLIP6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 KIAA2012Q0VF49 1180 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 PPP1R42Q7Z4L9 355 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 ARMC10Q8N2F6 343 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 PLEKHF1Q96S99 279 aa6.7□□□□□ -1.34
R3HDM1-218ENST00000487294 RUSC1Q9BVN2 902 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms