RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 MAML3Q96JK9 1138 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 RNF146Q9NTX7 359 aa14.64□□□□□ -0.07
PTCD1-205ENST00000485746 MYH4Q9Y623 1939 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 ZNF792Q3KQV3 632 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 ASPRV1Q53RT3 343 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 CREB3L3Q68CJ9 461 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 CHST3Q7LGC8 479 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 UBA5Q9GZZ9 404 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 RANBP17Q9H2T7 1088 aaKnown RBP14.63□□□□□ -0.07
PTCD1-205ENST00000485746 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 PNMA2Q9UL42 364 aa14.63□□□□□ -0.07
PTCD1-205ENST00000485746 DIS3Q9Y2L1 958 aaKnown RBP14.63□□□□□ -0.07
PTCD1-205ENST00000485746 POTEB2H3BUK9 544 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 ICAM1P05362 532 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 NSMFQ6X4W1 530 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 NFXL1Q6ZNB6 911 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 DPF3Q92784 378 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 HTATIP2Q9BUP3 242 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 CNPY2Q9Y2B0 182 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 TAF6LQ9Y6J9 622 aa14.62□□□□□ -0.07
PTCD1-205ENST00000485746 MSCO60682 206 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
PTCD1-205ENST00000485746 STOX1Q6ZVD7 989 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 NECAB2Q7Z6G3 386 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 CATIPQ7Z7H3 387 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 TINF2Q9BSI4 451 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 CRISPLD2Q9H0B8 497 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 DDX20Q9UHI6 824 aaKnown RBP14.61□□□□□ -0.07
PTCD1-205ENST00000485746 ZNF536O15090 1300 aa14.61□□□□□ -0.07
PTCD1-205ENST00000485746 RLFQ13129 1914 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 PTPDC1A2A3K4 754 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 PRC1O43663 620 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 CYBAP13498 195 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 MCM5P33992 734 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 NECTIN1Q15223 517 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 SEC23AQ15436 765 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 MUM1L1Q5H9M0 696 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 ANO1Q5XXA6 986 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 ANKLE1Q8NAG6 615 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 PAWRQ96IZ0 340 aaKnown RBP14.6□□□□□ -0.07
PTCD1-205ENST00000485746 CPVLQ9H3G5 476 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 OGDHLQ9ULD0 1010 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 A0A0G2JMZ2 1700 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 PFASO15067 1338 aa14.6□□□□□ -0.07
PTCD1-205ENST00000485746 DOCK3Q8IZD9 2030 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 CCDC69A6NI79 296 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 TAL1P17542 331 aaPredicted RBP14.59□□□□□ -0.07
PTCD1-205ENST00000485746 USH1GQ495M9 461 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 MB21D2Q8IYB1 491 aaPredicted RBP14.59□□□□□ -0.07
PTCD1-205ENST00000485746 ADGRF4Q8IZF3 695 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 MSL3Q8N5Y2 521 aaKnown RBP14.59□□□□□ -0.07
PTCD1-205ENST00000485746 TRPV1Q8NER1 839 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 NUP133Q8WUM0 1156 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 A1CFQ9NQ94 594 aaKnown RBP14.59□□□□□ -0.07
PTCD1-205ENST00000485746 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
PTCD1-205ENST00000485746 PLXNB2O15031 1838 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 HTTP42858 3142 aa14.59□□□□□ -0.07
PTCD1-205ENST00000485746 DNAJC25-GNG10A0A024R161 153 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 KLRF2D3W0D1 207 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 SEPT4O43236 478 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 CNTN2Q02246 1040 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 CDC37Q16543 378 aaPredicted RBP14.58□□□□□ -0.08
PTCD1-205ENST00000485746 LHX8Q68G74 356 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCD1-205ENST00000485746 ZNF467Q7Z7K2 595 aaPredicted RBP14.58□□□□□ -0.08
PTCD1-205ENST00000485746 TMTC2Q8N394 836 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 STAG2Q8N3U4 1231 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 TMEM87BQ96K49 555 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
PTCD1-205ENST00000485746 ASB14A6NK59 587 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 REC8O95072 547 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 RARBP10826 455 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 CALML3P27482 149 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 ANTXR2P58335 489 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 BAATQ14032 418 aaPredicted RBP14.57□□□□□ -0.08
PTCD1-205ENST00000485746 KRT32Q14532 448 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 SYNE3Q6ZMZ3 975 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 FBXO11Q86XK2 927 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 ARRDC4Q8NCT1 418 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 IGDCC4Q8TDY8 1250 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 DIS3LQ8TF46 1054 aaKnown RBP14.57□□□□□ -0.08
PTCD1-205ENST00000485746 NEK1Q96PY6 1258 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 SENP2Q9HC62 589 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 FAM184BQ9ULE4 1060 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 SYNGAP1Q96PV0 1343 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 LAMA4Q16363 1823 aa14.57□□□□□ -0.08
PTCD1-205ENST00000485746 NFIBO00712 420 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 KIF5BP33176 963 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 FGD1P98174 961 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 GRM4Q14833 912 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 MAMDC4Q6UXC1 1216 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 RNF207Q6ZRF8 634 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 NOL8Q76FK4 1167 aaKnown RBP14.56□□□□□ -0.08
PTCD1-205ENST00000485746 ARMCX2Q7L311 632 aa14.56□□□□□ -0.08
PTCD1-205ENST00000485746 CTCFLQ8NI51 663 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms