RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 PCGF6Q9BYE7 350 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 SPC25Q9HBM1 224 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 COG2Q14746 738 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 CCDC144BQ3MJ40 725 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 ZGPATQ8N5A5 531 aaKnown RBP12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 TSR2Q969E8 191 aaKnown RBP12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 SH2B1Q9NRF2 756 aaPredicted RBP12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 GINM1Q9NU53 330 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 PALD1Q9ULE6 856 aa12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 DIS3Q9Y2L1 958 aaKnown RBP12.42□□□□□ -0.42
EXOSC1-210ENST00000485122 NUBP1P53384 320 aa12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 NBPF20Q3BBV1 942 aa12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 ANKRD44Q8N8A2 993 aa12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 PPP1R13LQ8WUF5 828 aa12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 CHAMP1Q96JM3 812 aa12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 ALDH8A1Q9H2A2 487 aaPredicted RBP12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 NSUN3Q9H649 340 aaKnown RBP12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 GNL3LQ9NVN8 582 aaKnown RBP12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 SAP30BPQ9UHR5 308 aaKnown RBP12.41□□□□□ -0.42
EXOSC1-210ENST00000485122 CACNA1FO60840 1977 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 TRIP12Q14669 1992 aaPredicted RBP12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 LOC730098B7Z3J9 87 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 LINC01565O15544 149 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 ADORA1P30542 326 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 PTPROQ16827 1216 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 RSPO4Q2I0M5 234 aaPredicted RBP12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 TCTN1Q2MV58 587 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-210ENST00000485122 TNKSO95271 1327 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 FLT1P17948 1338 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 MYH1P12882 1939 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 SEMA3EO15041 775 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 BAIAP3O94812 1187 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 GJB5O95377 273 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 NBPF7P0C2Y1 421 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 IQCF3P0C7M6 154 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 KCNG4Q8TDN1 519 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 TGFBRAP1Q8WUH2 860 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 RIPOR3Q96MK2 946 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 RAD9AQ99638 391 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 HOXC10Q9NYD6 342 aa12.39□□□□□ -0.43
EXOSC1-210ENST00000485122 ZNF292O60281 2723 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 CSPG5O95196 566 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 ARP10275 920 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 RFC2P35250 354 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 FOXP4Q8IVH2 680 aaPredicted RBP12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 MB21D1Q8N884 522 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 CTNNA3Q9UI47 895 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 PCDHGC5Q9Y5F6 944 aa12.38□□□□□ -0.43
EXOSC1-210ENST00000485122 A0A1W2PRG0 241 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 FLOT1O75955 427 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 HYAL1Q12794 435 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 CBX2Q14781 532 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 CCDC102BQ68D86 513 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
EXOSC1-210ENST00000485122 EYA2O00167 538 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 CABYRO75952 493 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 SLC25A27O95847 323 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 GUCY1A2P33402 732 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 NKX3-2P78367 333 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 GPM6BQ13491 265 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 FSCN1Q16658 493 aaKnown RBP12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 PTPN21Q16825 1174 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 SPTY2D1Q68D10 685 aaPredicted RBP12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 ATG9AQ7Z3C6 839 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 RPGRIP1Q96KN7 1286 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 SIL1Q9H173 461 aa12.36□□□□□ -0.43
EXOSC1-210ENST00000485122 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms