RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 BRCA2P51587 3418 aa25.96■■□□□ 1.75
CNTNAP3B-208ENST00000484254 SLC27A2O14975 620 aa25.95■■□□□ 1.74
CNTNAP3B-208ENST00000484254 PGK2P07205 417 aa25.95■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CREB3L3Q68CJ9 461 aa25.95■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CCDC174Q6PII3 467 aa25.95■■□□□ 1.74
CNTNAP3B-208ENST00000484254 DIS3Q9Y2L1 958 aaKnown RBP25.95■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ZNF792Q3KQV3 632 aa25.94■■□□□ 1.74
CNTNAP3B-208ENST00000484254 TKFCQ3LXA3 575 aa25.94■■□□□ 1.74
CNTNAP3B-208ENST00000484254 MB21D2Q8IYB1 491 aaPredicted RBP25.94■■□□□ 1.74
CNTNAP3B-208ENST00000484254 MAML3Q96JK9 1138 aa25.94■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CRISPLD2Q9H0B8 497 aa25.94■■□□□ 1.74
CNTNAP3B-208ENST00000484254 TNRC18O15417 2968 aaPredicted RBP25.94■■□□□ 1.74
CNTNAP3B-208ENST00000484254 IFIT3O14879 490 aaKnown RBP25.93■■□□□ 1.74
CNTNAP3B-208ENST00000484254 GOLGA8HP0CJ92 632 aa25.93■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CYP2C19P33261 490 aa25.93■■□□□ 1.74
CNTNAP3B-208ENST00000484254 DDX11Q96FC9 970 aa25.93■■□□□ 1.74
CNTNAP3B-208ENST00000484254 HOMER2Q9NSB8 354 aa25.93■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ERICH2A1L162 156 aa25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 TFRCP02786 760 aaKnown RBP25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ICAM1P05362 532 aa25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CCND3P30281 292 aaPredicted RBP25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 SART3Q15020 963 aaKnown RBP25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ASPRV1Q53RT3 343 aa25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ACAD9Q9H845 621 aa25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 RNF146Q9NTX7 359 aa25.92■■□□□ 1.74
CNTNAP3B-208ENST00000484254 DNAJC25-GNG10A0A024R161 153 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ALAS1P13196 640 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ANTXR2P58335 489 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CHST3Q7LGC8 479 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 ANKRD35Q8N283 1001 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 TRERF1Q96PN7 1200 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CCPG1Q9ULG6 757 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 PLXNA1Q9UIW2 1896 aa25.91■■□□□ 1.74
CNTNAP3B-208ENST00000484254 PARP1P09874 1014 aaKnown RBP25.9■■□□□ 1.74
CNTNAP3B-208ENST00000484254 WTAPQ15007 396 aa25.9■■□□□ 1.74
CNTNAP3B-208ENST00000484254 RNF20Q5VTR2 975 aa25.9■■□□□ 1.74
CNTNAP3B-208ENST00000484254 CYBAP13498 195 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 TMEM67Q5HYA8 995 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 UBE2Q1Q7Z7E8 422 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 TRPV1Q8NER1 839 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 IGDCC4Q8TDY8 1250 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 MTA3Q9BTC8 594 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 UBA5Q9GZZ9 404 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 PNMA2Q9UL42 364 aa25.89■■□□□ 1.74
CNTNAP3B-208ENST00000484254 MCM5P33992 734 aa25.88■■□□□ 1.73
CNTNAP3B-208ENST00000484254 TINF2Q9BSI4 451 aa25.88■■□□□ 1.73
CNTNAP3B-208ENST00000484254 CPVLQ9H3G5 476 aa25.88■■□□□ 1.73
CNTNAP3B-208ENST00000484254 SENP2Q9HC62 589 aa25.88■■□□□ 1.73
CNTNAP3B-208ENST00000484254 A1CFQ9NQ94 594 aaKnown RBP25.88■■□□□ 1.73
CNTNAP3B-208ENST00000484254 OGDHLQ9ULD0 1010 aa25.88■■□□□ 1.73
CNTNAP3B-208ENST00000484254 PRC1O43663 620 aa25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 FARP2O94887 1054 aaPredicted RBP25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 MUM1L1Q5H9M0 696 aa25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 LHX8Q68G74 356 aa25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 ZNF467Q7Z7K2 595 aaPredicted RBP25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 MSL3Q8N5Y2 521 aaKnown RBP25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 WDR19Q8NEZ3 1342 aa25.87■■□□□ 1.73
CNTNAP3B-208ENST00000484254 CNGA1P29973 690 aa25.86■■□□□ 1.73
CNTNAP3B-208ENST00000484254 ADGRF4Q8IZF3 695 aa25.86■■□□□ 1.73
CNTNAP3B-208ENST00000484254 ANKLE1Q8NAG6 615 aa25.86■■□□□ 1.73
CNTNAP3B-208ENST00000484254 NRBP1Q9UHY1 535 aa25.86■■□□□ 1.73
CNTNAP3B-208ENST00000484254 PFASO15067 1338 aa25.86■■□□□ 1.73
CNTNAP3B-208ENST00000484254 MSCO60682 206 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 TAL1P17542 331 aaPredicted RBP25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 GRM4Q14833 912 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 TSGA10IPQ3SY00 556 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 PRAMEF19Q5SWL8 479 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 MAMDC4Q6UXC1 1216 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 STAG2Q8N3U4 1231 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 TMEM87BQ96K49 555 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 LY9Q9HBG7 655 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 DDX20Q9UHI6 824 aaKnown RBP25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 MAD2L2Q9UI95 211 aa25.85■■□□□ 1.73
CNTNAP3B-208ENST00000484254 PALM3A6NDB9 673 aaPredicted RBP25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 SMCHD1A6NHR9 2005 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 KLRF2D3W0D1 207 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 TROAPQ12815 778 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 COL9A3Q14050 684 aaPredicted RBP25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 CATIPQ7Z7H3 387 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 FAM133AQ8N9E0 248 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 FGD4Q96M96 766 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 SYNGAP1Q96PV0 1343 aa25.84■■□□□ 1.73
CNTNAP3B-208ENST00000484254 POTEB2H3BUK9 544 aa25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 CNTN2Q02246 1040 aa25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 CDC37Q16543 378 aaPredicted RBP25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 RASEFQ8IZ41 740 aa25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 GPHNQ9NQX3 736 aaPredicted RBP25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 CYP39A1Q9NYL5 469 aa25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 MKI67P46013 3256 aaKnown RBP25.83■■□□□ 1.73
CNTNAP3B-208ENST00000484254 SH2B2O14492 632 aaPredicted RBP25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 SEPT4O43236 478 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 REC8O95072 547 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 NSMFQ6X4W1 530 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 TMTC2Q8N394 836 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 CLEC4DQ8WXI8 215 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 NEK1Q96PY6 1258 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 JMJD4Q9H9V9 463 aa25.82■■□□□ 1.72
CNTNAP3B-208ENST00000484254 DHX16O60231 1041 aaKnown RBP25.81■■□□□ 1.72
CNTNAP3B-208ENST00000484254 MNX1P50219 401 aaPredicted RBP25.81■■□□□ 1.72
CNTNAP3B-208ENST00000484254 KRT32Q14532 448 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms