RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 LRRC2Q9BYS8 371 aa24.4■■□□□ 1.5
SEC13-217ENST00000482647 SLC5A4Q9NY91 659 aa24.4■■□□□ 1.5
SEC13-217ENST00000482647 FBXO40Q9UH90 709 aa24.4■■□□□ 1.5
SEC13-217ENST00000482647 PALM3A6NDB9 673 aaPredicted RBP24.39■■□□□ 1.49
SEC13-217ENST00000482647 HOXC6P09630 235 aa24.39■■□□□ 1.49
SEC13-217ENST00000482647 UBXN2AP68543 259 aa24.39■■□□□ 1.49
SEC13-217ENST00000482647 GRM4Q14833 912 aa24.39■■□□□ 1.49
SEC13-217ENST00000482647 TKFCQ3LXA3 575 aa24.39■■□□□ 1.49
SEC13-217ENST00000482647 ZNF654Q8IZM8 581 aa24.39■■□□□ 1.49
SEC13-217ENST00000482647 PARP14Q460N5 1801 aa24.39■■□□□ 1.49
SEC13-217ENST00000482647 KLRF2D3W0D1 207 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 DDAH1O94760 285 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 ICAM1P05362 532 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 BLOC1S2Q6QNY1 142 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 NUP133Q8WUM0 1156 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 MAP3K14Q99558 947 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 CPVLQ9H3G5 476 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 MAD2L2Q9UI95 211 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 CCPG1Q9ULG6 757 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 SLC12A7Q9Y666 1083 aa24.38■■□□□ 1.49
SEC13-217ENST00000482647 DHX16O60231 1041 aaKnown RBP24.37■■□□□ 1.49
SEC13-217ENST00000482647 SGMS1Q86VZ5 419 aa24.37■■□□□ 1.49
SEC13-217ENST00000482647 ADGRF4Q8IZF3 695 aa24.37■■□□□ 1.49
SEC13-217ENST00000482647 STAG2Q8N3U4 1231 aa24.37■■□□□ 1.49
SEC13-217ENST00000482647 HOMER2Q9NSB8 354 aa24.37■■□□□ 1.49
SEC13-217ENST00000482647 CAPN15O75808 1086 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 HMGCRP04035 888 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 INHAP05111 366 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 CALM1P0DP23 149 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 CALM2P0DP24 149 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 CALM3P0DP25 149 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 ALAS1P13196 640 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 KIF5BP33176 963 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 FGD1P98174 961 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 SYNE3Q6ZMZ3 975 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 CTCFLQ8NI51 663 aaPredicted RBP24.36■■□□□ 1.49
SEC13-217ENST00000482647 TCEANC2Q96MN5 208 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 TRERF1Q96PN7 1200 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 ACAD9Q9H845 621 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 VAT1LQ9HCJ6 419 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 RNF146Q9NTX7 359 aa24.36■■□□□ 1.49
SEC13-217ENST00000482647 COBLO75128 1261 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 MYCP01106 439 aaPredicted RBP24.35■■□□□ 1.49
SEC13-217ENST00000482647 IFFO2Q5TF58 517 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.35■■□□□ 1.49
SEC13-217ENST00000482647 ANKRD35Q8N283 1001 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 TRIB2Q92519 343 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 DDX11Q96FC9 970 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 TMEM106CQ9BVX2 250 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 DOCK3Q8IZD9 2030 aa24.35■■□□□ 1.49
SEC13-217ENST00000482647 CPA1P15085 419 aa24.34■■□□□ 1.49
SEC13-217ENST00000482647 CASTP20810 708 aaKnown RBP24.34■■□□□ 1.49
SEC13-217ENST00000482647 CDC37Q16543 378 aaPredicted RBP24.34■■□□□ 1.49
SEC13-217ENST00000482647 CCL14Q16627 93 aa24.34■■□□□ 1.49
SEC13-217ENST00000482647 NPLOC4Q8TAT6 608 aa24.34■■□□□ 1.49
SEC13-217ENST00000482647 MYL10Q9BUA6 226 aa24.34■■□□□ 1.49
SEC13-217ENST00000482647 JMJD4Q9H9V9 463 aa24.34■■□□□ 1.49
SEC13-217ENST00000482647 PGK2P07205 417 aa24.33■■□□□ 1.49
SEC13-217ENST00000482647 RPS6KB1P23443 525 aa24.33■■□□□ 1.49
SEC13-217ENST00000482647 LZTS2Q9BRK4 669 aa24.33■■□□□ 1.49
SEC13-217ENST00000482647 TM6SF1Q9BZW5 370 aa24.33■■□□□ 1.49
SEC13-217ENST00000482647 ZSWIM6Q9HCJ5 1215 aa24.33■■□□□ 1.49
SEC13-217ENST00000482647 DIS3Q9Y2L1 958 aaKnown RBP24.33■■□□□ 1.49
SEC13-217ENST00000482647 COL11A1P12107 1806 aaPredicted RBP24.33■■□□□ 1.48
SEC13-217ENST00000482647 GNAQP50148 359 aa24.32■■□□□ 1.48
SEC13-217ENST00000482647 MFSD14CQ5VZR4 134 aa24.32■■□□□ 1.48
SEC13-217ENST00000482647 OLFML2BQ68BL8 750 aa24.32■■□□□ 1.48
SEC13-217ENST00000482647 Q6ZUG5 572 aa24.32■■□□□ 1.48
SEC13-217ENST00000482647 RUFY3Q7L099 469 aa24.32■■□□□ 1.48
SEC13-217ENST00000482647 CYP46A1Q9Y6A2 500 aa24.32■■□□□ 1.48
SEC13-217ENST00000482647 CCL5P13501 91 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 ANAPC15P60006 121 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 MTFR1Q15390 333 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 ZNF792Q3KQV3 632 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 FBXL16Q8N461 479 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 FANCBQ8NB91 859 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 RNF208Q9H0X6 261 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 RIOX1Q9H6W3 641 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 FLRT1Q9NZU1 646 aa24.31■■□□□ 1.48
SEC13-217ENST00000482647 SEC24BO95487 1268 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 PRKAR2AP13861 404 aaKnown RBP24.3■■□□□ 1.48
SEC13-217ENST00000482647 SMARCA1P28370 1054 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 TRIM32Q13049 653 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 QRICH1Q2TAL8 776 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 C8orf34Q49A92 452 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 MUM1L1Q5H9M0 696 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 APOA5Q6Q788 366 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 MTMR8Q96EF0 704 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 MAML3Q96JK9 1138 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 UNC93B1Q9H1C4 597 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 A1CFQ9NQ94 594 aaKnown RBP24.3■■□□□ 1.48
SEC13-217ENST00000482647 PFASO15067 1338 aa24.3■■□□□ 1.48
SEC13-217ENST00000482647 PLXNB2O15031 1838 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 DNAJC25-GNG10A0A024R161 153 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 ZBTB5O15062 677 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 ZBTB43O43298 467 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 RXRAP19793 462 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 SOX10P56693 466 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 USH1GQ495M9 461 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms