RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 CTAGE5O15320 804 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 RNF113AO15541 343 aaKnown RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 CD4P01730 458 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 CHGBP05060 677 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 C6orf222P0C671 652 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 TSPY3P0CV98 308 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 TSPY8P0CW00 308 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 GNAT2P19087 354 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 GJA9P57773 515 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 PDE4BQ07343 736 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 ACVR2BQ13705 512 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 SNRNP48Q6IEG0 339 aaKnown RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 PSRC1Q6PGN9 363 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 ZNF467Q7Z7K2 595 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 TMEM199Q8N511 208 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 PCSK9Q8NBP7 692 aaKnown RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 HERVK_113Q902F9 699 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 CHMP4CQ96CF2 233 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 UHRF1Q96T88 793 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 NUP88Q99567 741 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 TEX13BQ9BXU2 312 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 NAPBQ9H115 298 aa8.43□□□□□ -1.06
COL17A1-205ENST00000480127 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 CXXC1Q9P0U4 656 aaPredicted RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 YBX2Q9Y2T7 364 aaKnown RBP8.43□□□□□ -1.06
COL17A1-205ENST00000480127 A0A0U1RQG5 324 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-205ENST00000480127 ATP2A1O14983 1001 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 GPAA1O43292 621 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 ZBED4O75132 1171 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 IGFBP4P22692 258 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 CYP2C18P33260 490 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 PLA2G5P39877 138 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 NKX3-2P78367 333 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 RAB30Q15771 203 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 GNASQ5JWF2 1037 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 ANKRD45Q5TZF3 282 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 CTR9Q6PD62 1173 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.42□□□□□ -1.06
COL17A1-205ENST00000480127 KBTBD3Q8NAB2 608 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 APPBP2Q92624 585 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 DDX11Q96FC9 970 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 NECAB3Q96P71 396 aaPredicted RBP8.42□□□□□ -1.06
COL17A1-205ENST00000480127 SLF1Q9BQI6 1058 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 KATNBL1Q9H079 304 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 PUS7LQ9H0K6 701 aaKnown RBP8.42□□□□□ -1.06
COL17A1-205ENST00000480127 NKX2-4Q9H2Z4 354 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 ABHD16BQ9H3Z7 469 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 IL23AQ9NPF7 189 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 MSRAQ9UJ68 235 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 MTMR7Q9Y216 660 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 UMODL1Q5DID0 1318 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 MUC3AQ02505 3323 aa8.42□□□□□ -1.06
COL17A1-205ENST00000480127 MYH8P13535 1937 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 ASTN1O14525 1302 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 F5H6K3 240 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 TLR3O15455 904 aaKnown RBP8.41□□□□□ -1.06
COL17A1-205ENST00000480127 PRDM1O75626 825 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 NDUFB10O96000 172 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 FGBP02675 491 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 BMP1P13497 986 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 KLRC3Q07444 240 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 PPP4R3BQ5MIZ7 849 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 NOL8Q76FK4 1167 aaKnown RBP8.41□□□□□ -1.06
COL17A1-205ENST00000480127 ARMCX2Q7L311 632 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 CPXCR1Q8N123 301 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 PRPF38AQ8NAV1 312 aaKnown RBP8.41□□□□□ -1.06
COL17A1-205ENST00000480127 SLC43A3Q8NBI5 491 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 KIFC2Q96AC6 838 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 VWCEQ96DN2 955 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 SLC28A3Q9HAS3 691 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 SPC25Q9HBM1 224 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 NYAP2Q9P242 653 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 CLIP2Q9UDT6 1046 aa8.41□□□□□ -1.06
COL17A1-205ENST00000480127 BAZ2AQ9UIF9 1905 aaKnown RBP8.41□□□□□ -1.06
COL17A1-205ENST00000480127 GRIN2DO15399 1336 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 TTC41PQ6P2S7 1318 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.4□□□□□ -1.06
COL17A1-205ENST00000480127 TSPY2A6NKD2 308 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 MX1P20591 662 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 RASA1P20936 1047 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 RABGGTBP53611 331 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 BEX3Q00994 111 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 TFF2Q03403 129 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 GIMAP6Q6P9H5 292 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 CXCL17Q6UXB2 119 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 OTOP2Q7RTS6 562 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 ANKRD35Q8N283 1001 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 FAM122AQ96E09 287 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 STRBPQ96SI9 672 aaKnown RBP8.4□□□□□ -1.06
COL17A1-205ENST00000480127 HIPK3Q9H422 1215 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 DCTPP1Q9H773 170 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 SLC38A10Q9HBR0 1119 aa8.4□□□□□ -1.06
COL17A1-205ENST00000480127 RAVER2Q9HCJ3 691 aaKnown RBP8.4□□□□□ -1.06
COL17A1-205ENST00000480127 HOMER2Q9NSB8 354 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms