RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 ZNF280CQ8ND82 737 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 SNIP1Q8TAD8 396 aaKnown RBP6.45□□□□□ -1.38
CAPN9-204ENST00000480004 DNAAF4Q8WXU2 420 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 EDC3Q96F86 508 aaKnown RBP6.45□□□□□ -1.38
CAPN9-204ENST00000480004 APBA2Q99767 749 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 MKNK1Q9BUB5 465 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 KLF16Q9BXK1 252 aaPredicted RBP6.45□□□□□ -1.38
CAPN9-204ENST00000480004 OSBPL5Q9H0X9 879 aaPredicted RBP6.45□□□□□ -1.38
CAPN9-204ENST00000480004 TSPAN10Q9H1Z9 355 aaPredicted RBP6.45□□□□□ -1.38
CAPN9-204ENST00000480004 AS3MTQ9HBK9 375 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 USP40Q9NVE5 1235 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 SERTAD1Q9UHV2 236 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 IQSEC3Q9UPP2 1182 aaPredicted RBP6.45□□□□□ -1.38
CAPN9-204ENST00000480004 WASF2Q9Y6W5 498 aa6.45□□□□□ -1.38
CAPN9-204ENST00000480004 MAST2Q6P0Q8 1798 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 H3BRB1 525 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 IL2RAP01589 272 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 BMP1P13497 986 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 RAG1P15918 1043 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 CCNA1P78396 465 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 ATP2B2Q01814 1243 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 NFIAQ12857 509 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 SPP2Q13103 211 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 ZNF211Q13398 564 aaPredicted RBP6.44□□□□□ -1.38
CAPN9-204ENST00000480004 SNX17Q15036 470 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 CAPN12Q6ZSI9 719 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 Q6ZVU0 165 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 PLEKHH3Q7Z736 793 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 CCDC146Q8IYE0 955 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 C8orf58Q8NAV2 365 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 KDF1Q8NAX2 398 aaPredicted RBP6.44□□□□□ -1.38
CAPN9-204ENST00000480004 HELQQ8TDG4 1101 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 USP6NLQ92738 828 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 ESYT1Q9BSJ8 1104 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 IDI2Q9BXS1 227 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 EPHX3Q9H6B9 360 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 TUT1Q9H6E5 874 aaKnown RBP6.44□□□□□ -1.38
CAPN9-204ENST00000480004 ARHGEF10LQ9HCE6 1279 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 TMOD4Q9NZQ9 345 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 DAGLAQ9Y4D2 1042 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 HRH3Q9Y5N1 445 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 DNMT3AQ9Y6K1 912 aaPredicted RBP6.44□□□□□ -1.38
CAPN9-204ENST00000480004 UTYO14607 1347 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 KIF16BQ96L93 1317 aa6.44□□□□□ -1.38
CAPN9-204ENST00000480004 LTBP2Q14767 1821 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 CDK2AP1O14519 115 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 IFIT1P09914 478 aaKnown RBP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 NPR3P17342 541 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 HOXA7P31268 230 aaPredicted RBP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 MRE11P49959 708 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 HMGCS2P54868 508 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 FPGSQ05932 587 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 CLN3Q13286 438 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 WDR43Q15061 677 aaKnown RBP eCLIP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 TRIM60Q495X7 471 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 CCDC129Q6ZRS4 1044 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 GPR142Q7Z601 462 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 SLC9A9Q8IVB4 645 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 GLYCTKQ8IVS8 523 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 HERVK_113Q902F9 699 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 C2orf49Q9BVC5 232 aaPredicted RBP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 PRKD2Q9BZL6 878 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 KCNH6Q9H252 994 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 PRDM12Q9H4Q4 367 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.43□□□□□ -1.38
CAPN9-204ENST00000480004 PDLIM7Q9NR12 457 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 RAB6BQ9NRW1 208 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 PLA2G2EQ9NZK7 142 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 MSRAQ9UJ68 235 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 A0A1B0GUL6 1792 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 VCANP13611 3396 aa6.43□□□□□ -1.38
CAPN9-204ENST00000480004 PTPRFP10586 1907 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 TRIM43BA6NCK2 446 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 SLC15A5A6NIM6 579 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 C19orf81C9J6K1 198 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 KIAA0355O15063 1070 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 GDF9O60383 454 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 PDE8BO95263 885 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 LDHBP07195 334 aaKnown RBP6.42□□□□□ -1.38
CAPN9-204ENST00000480004 CLTBP09497 229 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 RGS3P49796 1198 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 PSMA6P60900 246 aaKnown RBP6.42□□□□□ -1.38
CAPN9-204ENST00000480004 HERVK_113P62684 666 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 ERVK-24P63145 666 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 FOXC1Q12948 553 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 RAB30Q15771 203 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 ECM1Q16610 540 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 CCL14Q16627 93 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 METTL24Q5JXM2 366 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 GJC2Q5T442 439 aaPredicted RBP6.42□□□□□ -1.38
CAPN9-204ENST00000480004 ZFPM1Q8IX07 1006 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 ZGPATQ8N5A5 531 aaKnown RBP6.42□□□□□ -1.38
CAPN9-204ENST00000480004 VTI1AQ96AJ9 217 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 TRIM43Q96BQ3 446 aaPredicted RBP6.42□□□□□ -1.38
CAPN9-204ENST00000480004 ITPKCQ96DU7 683 aa6.42□□□□□ -1.38
CAPN9-204ENST00000480004 GNL3LQ9NVN8 582 aaKnown RBP6.42□□□□□ -1.38
CAPN9-204ENST00000480004 ATRNL1Q5VV63 1379 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms