RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 KIF23Q02241 960 aaPredicted RBP16.32■□□□□ 0.2
RPP40-205ENST00000479782 PABPC4Q13310 644 aaKnown RBP eCLIP16.32■□□□□ 0.2
RPP40-205ENST00000479782 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
RPP40-205ENST00000479782 COG2Q14746 738 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 GADL1Q6ZQY3 521 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 BRAPQ7Z569 592 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 FBXO11Q86XK2 927 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 ZNF784Q8NCA9 323 aaPredicted RBP16.32■□□□□ 0.2
RPP40-205ENST00000479782 DAGLBQ8NCG7 672 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 FOXP1Q9H334 677 aaPredicted RBP16.32■□□□□ 0.2
RPP40-205ENST00000479782 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 PNMA2Q9UL42 364 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 KCNJ14Q9UNX9 436 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 AGTPBP1Q9UPW5 1226 aa16.32■□□□□ 0.2
RPP40-205ENST00000479782 BAZ2BQ9UIF8 2168 aaKnown RBP16.31■□□□□ 0.2
RPP40-205ENST00000479782 RLFQ13129 1914 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 MYH15Q9Y2K3 1946 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
RPP40-205ENST00000479782 CETPP11597 493 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPP40-205ENST00000479782 GNA11P29992 359 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 DSG3P32926 999 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 KRT2P35908 639 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 RESTQ13127 1097 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 FOXD4L5Q5VV16 416 aaPredicted RBP16.31■□□□□ 0.2
RPP40-205ENST00000479782 SPRYD7Q5W111 196 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 SAPCD2Q86UD0 394 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
RPP40-205ENST00000479782 FOXD4L4Q8WXT5 416 aaPredicted RBP16.31■□□□□ 0.2
RPP40-205ENST00000479782 SHISA4Q96DD7 197 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 C6orf50Q9HD87 102 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 HOXC10Q9NYD6 342 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 TLL2Q9Y6L7 1015 aa16.31■□□□□ 0.2
RPP40-205ENST00000479782 ZBED4O75132 1171 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 MOGSQ13724 837 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 TREML2Q5T2D2 321 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 TYW1BQ6NUM6 668 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 TEX2Q8IWB9 1127 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 COA7Q96BR5 231 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 PCDHA4Q9UN74 947 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
RPP40-205ENST00000479782 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
RPP40-205ENST00000479782 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 VWA5AO00534 786 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 ICAM1P05362 532 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 OAZ1P54368 228 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 NPY5RQ15761 445 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 BLIDQ8IZY5 108 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 HHIPL1Q96JK4 782 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 GBP4Q96PP9 640 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 SLC45A1Q9Y2W3 748 aa16.29■□□□□ 0.2
RPP40-205ENST00000479782 BTBD18B2RXH4 712 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
RPP40-205ENST00000479782 SNAP25P60880 206 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
RPP40-205ENST00000479782 ATL3Q6DD88 541 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
RPP40-205ENST00000479782 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 RASAL3Q86YV0 1011 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 MB21D1Q8N884 522 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 ATG4CQ96DT6 458 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
RPP40-205ENST00000479782 ZNF536O15090 1300 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 ABCB11O95342 1321 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 COL11A1P12107 1806 aaPredicted RBP16.27■□□□□ 0.2
RPP40-205ENST00000479782 CCL15-CCL14A0A0B4J2E2 113 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 SPDYE16A6NNV3 312 aaPredicted RBP16.27■□□□□ 0.2
RPP40-205ENST00000479782 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 OSBPP22059 807 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 ADCY7P51828 1080 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 CCL15Q16663 113 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 USH1GQ495M9 461 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 CCDC174Q6PII3 467 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 CUL5Q93034 780 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
RPP40-205ENST00000479782 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.2
RPP40-205ENST00000479782 RBBP6Q7Z6E9 1792 aaKnown RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 M0R2N6 131 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 BAG4O95429 457 aaKnown RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 SLC10A3P09131 477 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
RPP40-205ENST00000479782 NR5A1Q13285 461 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 ANKRD23Q86SG2 305 aa16.26■□□□□ 0.19
RPP40-205ENST00000479782 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms