RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 RAB3GAP1Q15042 981 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 CCDC85BQ15834 202 aaPredicted RBP9.16□□□□□ -0.94
HMGCL-205ENST00000479458 GJC2Q5T442 439 aaPredicted RBP9.16□□□□□ -0.94
HMGCL-205ENST00000479458 VPS53Q5VIR6 699 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 OLFML2BQ68BL8 750 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 TMEM179Q6ZVK1 233 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 CENPQQ7L2Z9 268 aaPredicted RBP9.16□□□□□ -0.94
HMGCL-205ENST00000479458 ANKRD33Q7Z3H0 272 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 ZNF589Q86UQ0 364 aaPredicted RBP9.16□□□□□ -0.94
HMGCL-205ENST00000479458 CCAR1Q8IX12 1150 aaKnown RBP9.16□□□□□ -0.94
HMGCL-205ENST00000479458 FBXO22Q8NEZ5 403 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 CCDC17Q96LX7 622 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 NACAP1Q9BZK3 213 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 USP34Q70CQ2 3546 aa9.16□□□□□ -0.94
HMGCL-205ENST00000479458 GREB1LQ9C091 1923 aaPredicted RBP9.15□□□□□ -0.94
HMGCL-205ENST00000479458 CCDC171Q6TFL3 1326 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 MINDY4BA8MYZ0 360 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 MPHOSPH10O00566 681 aaKnown RBP9.15□□□□□ -0.94
HMGCL-205ENST00000479458 IGFBP4P22692 258 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 PTPREP23469 700 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 CNGA1P29973 690 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 PBX2P40425 430 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 ATP2B2Q01814 1243 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 TFF2Q03403 129 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 PPIGQ13427 754 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMGCL-205ENST00000479458 GRB14Q14449 540 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 SEPT2Q15019 361 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 LRRC41Q15345 812 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 MCMDC2Q4G0Z9 681 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 TRPV1Q8NER1 839 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 ACER1Q8TDN7 264 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 C12orf42Q96LP6 360 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.15□□□□□ -0.94
HMGCL-205ENST00000479458 NAPBQ9H115 298 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 TMOD4Q9NZQ9 345 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 MSRAQ9UJ68 235 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
HMGCL-205ENST00000479458 HIP1O00291 1037 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 ST18O60284 1047 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 TIMP1P01033 207 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 NEFLP07196 543 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 RASA1P20936 1047 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 ADCYAP1R1P41586 468 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 PPARAQ07869 468 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 ALX1Q15699 326 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 TMEM240Q5SV17 173 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 MFSD5Q6N075 450 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 LBX2Q6XYB7 198 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 CLEC10AQ8IUN9 316 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 STK11IPQ8N1F8 1099 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 KHSRPQ92945 711 aaKnown RBP eCLIP9.14□□□□□ -0.95
HMGCL-205ENST00000479458 FEZ1Q99689 392 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 KIAA1683Q9H0B3 1180 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 SLC28A3Q9HAS3 691 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
HMGCL-205ENST00000479458 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 A0A1W2PRG0 241 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 HSPD1P10809 573 aaKnown RBP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 USP14P54578 494 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 IRX5P78411 483 aaPredicted RBP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 ICA1Q05084 483 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 FAAP100Q0VG06 881 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 PSRC1Q6PGN9 363 aaPredicted RBP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 CWC27Q6UX04 472 aaKnown RBP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 C16orf59Q7L2K0 433 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 SIAH1Q8IUQ4 282 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 MKNK2Q9HBH9 465 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 RYDENQ9NUL5 291 aaKnown RBP9.13□□□□□ -0.95
HMGCL-205ENST00000479458 TMEM39AQ9NV64 488 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 NRBP1Q9UHY1 535 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 TBX21Q9UL17 535 aa9.13□□□□□ -0.95
HMGCL-205ENST00000479458 FAM86C2PA6NEL3 165 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 STRNO43815 780 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 PRDM1O75626 825 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 FGAP02671 866 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 SLC3A2P08195 630 aaKnown RBP9.12□□□□□ -0.95
HMGCL-205ENST00000479458 VCAM1P19320 739 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 CYP2C19P33261 490 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
HMGCL-205ENST00000479458 SKAP1Q86WV1 359 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 NPLOC4Q8TAT6 608 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 SLC39A7Q92504 469 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 CCDC136Q96JN2 1154 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 FBXL18Q96ME1 805 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
HMGCL-205ENST00000479458 IL25Q9H293 177 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 MTIF3Q9H2K0 278 aaKnown RBP9.12□□□□□ -0.95
HMGCL-205ENST00000479458 KANSL2Q9H9L4 492 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 ZNF287Q9HBT7 754 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 ANAPC4Q9UJX5 808 aa9.12□□□□□ -0.95
HMGCL-205ENST00000479458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
HMGCL-205ENST00000479458 TMX2Q9Y320 296 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms