RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 CPVLQ9H3G5 476 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 GPCPD1Q9NPB8 672 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 PCDH10Q9P2E7 1040 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 MYH6P13533 1939 aa22.1■■□□□ 1.13
SREBF1-212ENST00000478616 FDX1P10109 184 aa22.09■■□□□ 1.13
SREBF1-212ENST00000478616 SLC4A3P48751 1232 aa22.09■■□□□ 1.13
SREBF1-212ENST00000478616 CCDC96Q2M329 555 aa22.09■■□□□ 1.13
SREBF1-212ENST00000478616 ANO1Q5XXA6 986 aa22.09■■□□□ 1.13
SREBF1-212ENST00000478616 MAP4K1Q92918 833 aa22.09■■□□□ 1.13
SREBF1-212ENST00000478616 ZSCAN10Q96SZ4 725 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-212ENST00000478616 CTNNA3Q9UI47 895 aa22.09■■□□□ 1.13
SREBF1-212ENST00000478616 RANBP2P49792 3224 aaKnown RBP22.08■■□□□ 1.13
SREBF1-212ENST00000478616 SYDE2Q5VT97 1194 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 CCDC174Q6PII3 467 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 MAMDC4Q6UXC1 1216 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 NECAB2Q7Z6G3 386 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 FAM133AQ8N9E0 248 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 CHST13Q8NET6 341 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 KATNBL1Q9H079 304 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 LSG1Q9H089 658 aaKnown RBP22.08■■□□□ 1.13
SREBF1-212ENST00000478616 SENP2Q9HC62 589 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 A1CFQ9NQ94 594 aaKnown RBP22.08■■□□□ 1.13
SREBF1-212ENST00000478616 HOMER2Q9NSB8 354 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.13
SREBF1-212ENST00000478616 DNAH12Q6ZR08 3092 aa22.08■■□□□ 1.13
SREBF1-212ENST00000478616 TNKSO95271 1327 aa22.07■■□□□ 1.12
SREBF1-212ENST00000478616 SEPT4O43236 478 aa22.07■■□□□ 1.12
SREBF1-212ENST00000478616 CNTN2Q02246 1040 aa22.07■■□□□ 1.12
SREBF1-212ENST00000478616 RNF146Q9NTX7 359 aa22.07■■□□□ 1.12
SREBF1-212ENST00000478616 ISY1Q9ULR0 285 aaKnown RBP22.07■■□□□ 1.12
SREBF1-212ENST00000478616 SOWAHBA6NEL2 793 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 ADCY6O43306 1168 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 GOLGA8HP0CJ92 632 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 CNGA1P29973 690 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 ANTXR2P58335 489 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 SLC35G1Q2M3R5 365 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 RUFY2Q8WXA3 655 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 LENG1Q96BZ8 264 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-212ENST00000478616 PURBQ96QR8 312 aaKnown RBP22.06■■□□□ 1.12
SREBF1-212ENST00000478616 C11orf49Q9H6J7 331 aa22.06■■□□□ 1.12
SREBF1-212ENST00000478616 TRIOBPQ9H2D6 2365 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 ICAM1P05362 532 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 NT5C2P49902 561 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 IKQ13123 557 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-212ENST00000478616 BMP2KLQ5H9B9 411 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 PNMA1Q8ND90 353 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 DPF3Q92784 378 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 TRERF1Q96PN7 1200 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 ESYT1Q9BSJ8 1104 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 PRO3102Q9H379 93 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 ACAD9Q9H845 621 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 SLC5A4Q9NY91 659 aa22.05■■□□□ 1.12
SREBF1-212ENST00000478616 RBM8AQ9Y5S9 174 aaKnown RBP22.05■■□□□ 1.12
SREBF1-212ENST00000478616 BAZ2BQ9UIF8 2168 aaKnown RBP22.05■■□□□ 1.12
SREBF1-212ENST00000478616 E7EWF7 191 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 ALAS1P13196 640 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 ZNF467Q7Z7K2 595 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-212ENST00000478616 CLEC4DQ8WXI8 215 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 HTATIP2Q9BUP3 242 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 KRT23Q9C075 422 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 UBA5Q9GZZ9 404 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 FBXO40Q9UH90 709 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 NRBP1Q9UHY1 535 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 U3KPZ7 1027 aaPredicted RBP22.04■■□□□ 1.12
SREBF1-212ENST00000478616 SYNGAP1Q96PV0 1343 aa22.04■■□□□ 1.12
SREBF1-212ENST00000478616 NFIBO00712 420 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 IRX5P78411 483 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-212ENST00000478616 LRRC26Q2I0M4 334 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 TKFCQ3LXA3 575 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 IQCA1Q86XH1 822 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 ANKRD35Q8N283 1001 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 DDX11Q96FC9 970 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 CNNM2Q9H8M5 875 aa22.03■■□□□ 1.12
SREBF1-212ENST00000478616 MSCO60682 206 aa22.02■■□□□ 1.12
SREBF1-212ENST00000478616 GJC2Q5T442 439 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-212ENST00000478616 MB21D2Q8IYB1 491 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-212ENST00000478616 STAG2Q8N3U4 1231 aa22.02■■□□□ 1.12
SREBF1-212ENST00000478616 MSL3Q8N5Y2 521 aaKnown RBP22.02■■□□□ 1.12
SREBF1-212ENST00000478616 CYP39A1Q9NYL5 469 aa22.02■■□□□ 1.12
SREBF1-212ENST00000478616 CCPG1Q9ULG6 757 aa22.02■■□□□ 1.12
SREBF1-212ENST00000478616 CTDP1Q9Y5B0 961 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-212ENST00000478616 CHST3Q7LGC8 479 aa22.01■■□□□ 1.11
SREBF1-212ENST00000478616 GPHNQ9NQX3 736 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-212ENST00000478616 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-212ENST00000478616 COLQQ9Y215 455 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-212ENST00000478616 DNM1LO00429 736 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 ADAMTS4O75173 837 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 PTGS1P23219 599 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 NECTIN1Q15223 517 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 LRRC41Q15345 812 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 ARMCX2Q7L311 632 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 CCDC144CPQ8IYA2 1237 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 KAT14Q9H8E8 782 aa22■■□□□ 1.11
SREBF1-212ENST00000478616 LTBP2Q14767 1821 aa21.99■■□□□ 1.11
SREBF1-212ENST00000478616 CCDC178Q5BJE1 867 aa21.99■■□□□ 1.11
SREBF1-212ENST00000478616 TMEM63BQ5T3F8 832 aa21.99■■□□□ 1.11
SREBF1-212ENST00000478616 GPATCH4Q5T3I0 446 aaKnown RBP21.99■■□□□ 1.11
SREBF1-212ENST00000478616 MAD2L2Q9UI95 211 aa21.99■■□□□ 1.11
SREBF1-212ENST00000478616 WDR19Q8NEZ3 1342 aa21.99■■□□□ 1.11
SREBF1-212ENST00000478616 MYADML2A6NDP7 307 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms