RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.25■□□□□ 0.83
SMARCD3-210ENST00000477169 FAM160B2Q86V87 743 aa20.25■□□□□ 0.83
SMARCD3-210ENST00000477169 MSL3Q8N5Y2 521 aaKnown RBP20.25■□□□□ 0.83
SMARCD3-210ENST00000477169 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
SMARCD3-210ENST00000477169 TOMM22Q9NS69 142 aa20.25■□□□□ 0.83
SMARCD3-210ENST00000477169 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
SMARCD3-210ENST00000477169 DNAH12Q6ZR08 3092 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 SLC27A2O14975 620 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 PLA2G6O60733 806 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 SYN1P17600 705 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 MCCP23508 829 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 STAT2P52630 851 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 GJC2Q5T442 439 aaPredicted RBP20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 ANO1Q5XXA6 986 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 CREB3L3Q68CJ9 461 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
SMARCD3-210ENST00000477169 DNAJC25-GNG10A0A024R161 153 aa20.23■□□□□ 0.83
SMARCD3-210ENST00000477169 KBTBD13C9JR72 458 aa20.23■□□□□ 0.83
SMARCD3-210ENST00000477169 NMT2O60551 498 aa20.23■□□□□ 0.83
SMARCD3-210ENST00000477169 RCSD1Q6JBY9 416 aa20.23■□□□□ 0.83
SMARCD3-210ENST00000477169 MAMDC4Q6UXC1 1216 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 STOX1Q6ZVD7 989 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 ZNF467Q7Z7K2 595 aaPredicted RBP20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 ANKRD35Q8N283 1001 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 CNNM2Q9H8M5 875 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 TCP11L1Q9NUJ3 509 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 ISY1Q9ULR0 285 aaKnown RBP20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 CNPY2Q9Y2B0 182 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 SMCHD1A6NHR9 2005 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 SYNGAP1Q96PV0 1343 aa20.22■□□□□ 0.83
SMARCD3-210ENST00000477169 B4E1Z4 1266 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 E7EWF7 191 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 ZNF865P0CJ78 1059 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 RARBP10826 455 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 MAGEA10P43363 369 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 ATN1P54259 1190 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 IKQ13123 557 aaPredicted RBP20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 LRRC41Q15345 812 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 C8orf34Q49A92 452 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 ESR2Q92731 530 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 USP26Q9BXU7 913 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 KRT23Q9C075 422 aa20.21■□□□□ 0.83
SMARCD3-210ENST00000477169 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 KDM4AO75164 1064 aa20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 AKR1A1P14550 325 aa20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 TAL1P17542 331 aaPredicted RBP20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 NT5C2P49902 561 aa20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 SLC39A5Q6ZMH5 540 aa20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 KCTD1Q719H9 257 aa20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 XPNPEP3Q9NQH7 507 aa20.2■□□□□ 0.82
SMARCD3-210ENST00000477169 SNAI1O95863 264 aaPredicted RBP20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 HSPA4P34932 840 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 TKFCQ3LXA3 575 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 RNF20Q5VTR2 975 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 DCAF4Q8WV16 495 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 KCNB2Q92953 911 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 CHMP4CQ96CF2 233 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 ACAD9Q9H845 621 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 ZNF536O15090 1300 aa20.19■□□□□ 0.82
SMARCD3-210ENST00000477169 SZT2Q5T011 3432 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 SEC24BO95487 1268 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 TOP1P11387 765 aaKnown RBP20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 ADCYAP1R1P41586 468 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 RTP1P59025 263 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 TRDNQ13061 729 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 TSGA10IPQ3SY00 556 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 RNF180Q86T96 592 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 RASEFQ8IZ41 740 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 AGBL1Q96MI9 1066 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 TTC14Q96N46 770 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 TMEM47Q9BQJ4 181 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 PRR12Q9ULL5 1215 aa20.18■□□□□ 0.82
SMARCD3-210ENST00000477169 C1orf53Q5VUE5 145 aa20.17■□□□□ 0.82
SMARCD3-210ENST00000477169 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
SMARCD3-210ENST00000477169 NCOA7Q8NI08 942 aa20.17■□□□□ 0.82
SMARCD3-210ENST00000477169 UBE2OQ9C0C9 1292 aaKnown RBP20.17■□□□□ 0.82
SMARCD3-210ENST00000477169 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
SMARCD3-210ENST00000477169 PGK1P00558 417 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 SNX17Q15036 470 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 BTNL9Q6UXG8 535 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 RALYLQ86SE5 291 aaKnown RBP20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 MB21D2Q8IYB1 491 aaPredicted RBP20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 FGD4Q96M96 766 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 TRERF1Q96PN7 1200 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 ZKSCAN3Q9BRR0 538 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 ABHD16BQ9H3Z7 469 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 RNF146Q9NTX7 359 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 PRKAG2Q9UGJ0 569 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 PHF24Q9UPV7 400 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 MTMR7Q9Y216 660 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 ATP11BQ9Y2G3 1177 aa20.16■□□□□ 0.82
SMARCD3-210ENST00000477169 POTEB2H3BUK9 544 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 ACVR2BQ13705 512 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 COL9A3Q14050 684 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms