RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 PTPAQ15257 358 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 STX1AQ16623 288 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 PFKFB3Q16875 520 aaPredicted RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 FMR1NBQ8N0W7 255 aaPredicted RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 FBXL16Q8N461 479 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 CNOT7Q9UIV1 285 aaKnown RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 F5H6K3 240 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 KLRC3Q07444 240 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 GRM4Q14833 912 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 KARSQ15046 597 aaKnown RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 CCDC144BQ3MJ40 725 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 KIAA1755Q5JYT7 1200 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 TICAM2Q86XR7 235 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 SYMPKQ92797 1274 aaKnown RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 POLR3EQ9NVU0 708 aa12.98□□□□□ -0.33
KCNIP3-206ENST00000475491 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 COL11A2P13942 1736 aaPredicted RBP12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 DUOX1Q9NRD9 1551 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 A0A087X0B3 334 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 NPY5RQ15761 445 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 ZKSCAN4Q969J2 545 aaPredicted RBP12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 FGRP09769 529 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 EPS15P42566 896 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 FAM83BQ5T0W9 1011 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 KCNF1Q9H3M0 494 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 SNED1Q8TER0 1413 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 NOLC1Q14978 699 aaKnown RBP eCLIP12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 MYOZ2Q9NPC6 264 aa12.97□□□□□ -0.33
KCNIP3-206ENST00000475491 TDP2O95551 362 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 INPP5BP32019 993 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 TECP42680 631 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 TBCKQ8TEA7 893 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 ANO10Q9NW15 660 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 IFNKQ9P0W0 207 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 KIAA1468Q9P260 1216 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 ZNF541Q9H0D2 1346 aa12.96□□□□□ -0.33
KCNIP3-206ENST00000475491 MYO1BO43795 1136 aa12.96□□□□□ -0.34
KCNIP3-206ENST00000475491 GABPAQ06546 454 aa12.96□□□□□ -0.34
KCNIP3-206ENST00000475491 ZNF408Q9H9D4 720 aa12.96□□□□□ -0.34
KCNIP3-206ENST00000475491 PPP1R11O60927 126 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 RILPL1Q5EBL4 403 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 JMJD4Q9H9V9 463 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 COL4A5P29400 1685 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 PALM3A6NDB9 673 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 NDUFB10O96000 172 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 CFBP00751 764 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 ZNF75DP51815 510 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 UVSSAQ2YD98 709 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 ANGEL2Q5VTE6 544 aaKnown RBP12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 FOXP4Q8IVH2 680 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 JMYQ8N9B5 988 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 TRPM4Q8TD43 1214 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 STXBP3O00186 592 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 YEATS4O95619 227 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 PCDHA6Q9UN73 950 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 PCDHA8Q9Y5H6 950 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 DNAH12Q6ZR08 3092 aa12.95□□□□□ -0.34
KCNIP3-206ENST00000475491 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 SERPINC1P01008 464 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 SIAH1Q8IUQ4 282 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 HPS3Q969F9 1004 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 ZNF341Q9BYN7 854 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 FOXP1Q9H334 677 aaPredicted RBP12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 SERPINA10Q9UK55 444 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 PES1O00541 588 aaKnown RBP12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 QRICH1Q2TAL8 776 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 MOB2Q70IA6 237 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 TMC6Q7Z403 805 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 CACNB1Q02641 598 aaPredicted RBP12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 IL17AQ16552 155 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 CACTINQ8WUQ7 758 aaKnown RBP12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 ARAP2Q8WZ64 1704 aa12.94□□□□□ -0.34
KCNIP3-206ENST00000475491 FAM170AA1A519 330 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 POTEMA6NI47 508 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 FMR1Q06787 632 aaKnown RBP eCLIP12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 ZHX3Q9H4I2 956 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 RNF181Q9P0P0 153 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 CCDC88AQ3V6T2 1871 aa12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 VIL1P09327 827 aaKnown RBP12.93□□□□□ -0.34
KCNIP3-206ENST00000475491 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms