RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 RIN2Q8WYP3 895 aaPredicted RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 JPH2Q9BR39 696 aaPredicted RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 POLR3CQ9BUI4 534 aaPredicted RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 GBP3Q9H0R5 595 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 WDR35Q9P2L0 1181 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SALL4Q9UJQ4 1053 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SNX12Q9UMY4 172 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SIK3Q9Y2K2 1263 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SRPRBQ9Y5M8 271 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 U2SURPO15042 1029 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 AP1G1O43747 822 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 CHGBP05060 677 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 RARAP10276 462 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 ALAS1P13196 640 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 MDH1P40925 334 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 CLCN2P51788 898 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 RWDD2BP57060 319 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 KIF5AQ12840 1032 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 TRAF1Q13077 416 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 BCL2A1Q16548 175 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 CHADLQ6NUI6 762 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 VGLL2Q8N8G2 317 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 FSIP1Q8NA03 581 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 RUFY2Q8WXA3 655 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 SUCLG2Q96I99 432 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 ZIM3Q96PE6 472 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 NAPGQ99747 312 aaPredicted RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 LARP6Q9BRS8 491 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 DDX21Q9NR30 783 aaKnown RBP eCLIP4.62□□□□□ -1.67
USP16-205ENST00000474835 STK24Q9Y6E0 443 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 MAST3O60307 1309 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 FLT1P17948 1338 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 NUDT17P0C025 328 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 PDHBP11177 359 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 MMP13P45452 471 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 TRIM14Q14142 442 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 GRM2Q14416 872 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 AMOTQ4VCS5 1084 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 FAM91A1Q658Y4 838 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 GOLGA6L1Q8N7Z2 621 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 TMEM174Q8WUU8 243 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 NUDT16Q96DE0 195 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 CYFIP2Q96F07 1278 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 BICD1Q96G01 975 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 CAPS2Q9BXY5 557 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 TRPV5Q9NQA5 729 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 ZDHHC18Q9NUE0 388 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 RPL26L1Q9UNX3 145 aaKnown RBP4.62□□□□□ -1.67
USP16-205ENST00000474835 NFE2L3Q9Y4A8 694 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 PCDHA5Q9Y5H7 936 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 CCDC61Q9Y6R9 512 aa4.62□□□□□ -1.67
USP16-205ENST00000474835 A0A1B0GVL5 298 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 SPTLC2O15270 562 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 SNUPNO95149 360 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 CCDC175P0C221 793 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TUBP50607 506 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 UBASH3AP57075 661 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 GRIN1Q05586 938 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ACVR2BQ13705 512 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 SETDB1Q15047 1291 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 NAIF1Q69YI7 327 aaPredicted RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 BLOC1S2Q6QNY1 142 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TMTC1Q8IUR5 882 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CCDC50Q8IVM0 306 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 KBTBD3Q8NAB2 608 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 BAP1Q92560 729 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 GATA6Q92908 595 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ERGIC2Q96RQ1 377 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CRAMP1Q96RY5 1269 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 DMGDHQ9UI17 866 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 WWC3Q9ULE0 1092 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 MEGF6O75095 1541 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ZNF236Q9UL36 1845 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 MAGEB2O15479 319 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 DTNBO60941 627 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 EIF3JO75822 258 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 SRGNP10124 158 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 RPL13P26373 211 aaKnown RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 MARCKSP29966 332 aaPredicted RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 BNIP1Q12981 228 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CTC1Q2NKJ3 1217 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CCDC40Q4G0X9 1142 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 HSP90AB2PQ58FF8 381 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TBC1D9BQ66K14 1250 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ANO7Q6IWH7 933 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 RGS9BPQ6ZS82 235 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 B4GALNT4Q76KP1 1039 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ZNF276Q8N554 614 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CCDC155Q8N6L0 562 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 LRRC57Q8N9N7 239 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 ZNF396Q96N95 335 aaPredicted RBP4.61□□□□□ -1.67
USP16-205ENST00000474835 PLEKHG4BQ96PX9 1271 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TMEM237Q96Q45 408 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 CCT8L2Q96SF2 557 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 SH3GL3Q99963 347 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TLR10Q9BXR5 811 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 SH2D4AQ9H788 454 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 AGAP1Q9UPQ3 857 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 TRPC6Q9Y210 931 aa4.61□□□□□ -1.67
USP16-205ENST00000474835 GRID2IPA4D2P6 1211 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms