RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CACNA1AO00555 2505 aa3.4□□□□□ -1.86
CALD1-216ENST00000473714 MEGF6O75095 1541 aa3.4□□□□□ -1.86
CALD1-216ENST00000473714 GNAT3A8MTJ3 354 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 SUV39H1O43463 412 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 SASH1O94885 1247 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 HCLS1P14317 486 aaPredicted RBP3.4□□□□□ -1.87
CALD1-216ENST00000473714 NPR3P17342 541 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 CLCN7P51798 805 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 AP3B2Q13367 1082 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 TTLL4Q14679 1199 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 TXNRD1Q16881 649 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 NKPD1Q17RQ9 610 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.4□□□□□ -1.87
CALD1-216ENST00000473714 BAHD1Q8TBE0 780 aaPredicted RBP3.4□□□□□ -1.87
CALD1-216ENST00000473714 SNX29Q8TEQ0 813 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 MCOLN1Q9GZU1 580 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 C19orf73Q9NVV2 129 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 BTG4Q9NY30 223 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 SPG7Q9UQ90 795 aa3.4□□□□□ -1.87
CALD1-216ENST00000473714 LRPPRCP42704 1394 aaKnown RBP3.39□□□□□ -1.87
CALD1-216ENST00000473714 RRBP1Q9P2E9 1410 aaKnown RBP3.39□□□□□ -1.87
CALD1-216ENST00000473714 FZD6O60353 706 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 RECKO95980 971 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 HSP90B1P14625 803 aaKnown RBP3.39□□□□□ -1.87
CALD1-216ENST00000473714 ZNF76P36508 570 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 FMR1Q06787 632 aaKnown RBP eCLIP3.39□□□□□ -1.87
CALD1-216ENST00000473714 VPS37DQ86XT2 251 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 NT5DC4Q86YG4 428 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 TMEM151BQ8IW70 566 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 UBXN4Q92575 508 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 TCF12Q99081 682 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 TANGO6Q9C0B7 1094 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 CAPN10Q9HC96 672 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 NLRP2Q9NX02 1062 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 CNOT6Q9ULM6 557 aaKnown RBP3.39□□□□□ -1.87
CALD1-216ENST00000473714 CD2APQ9Y5K6 639 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 MBD5Q9P267 1494 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 GCC2Q8IWJ2 1684 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 TOPAZ1Q8N9V7 1692 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 SPATA31A1Q5TZJ5 1347 aa3.39□□□□□ -1.87
CALD1-216ENST00000473714 CNTNAP1P78357 1384 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 KIF15Q9NS87 1388 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 RIMS2Q9UQ26 1411 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 CICQ96RK0 1608 aaPredicted RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 VIRMAQ69YN4 1812 aaKnown RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 B3GALT4O96024 378 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 ATP2B1P20020 1258 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 EIF4BP23588 611 aaKnown RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 PLA2G5P39877 138 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 DLG4P78352 724 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 DAB2P98082 770 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 HDLBPQ00341 1268 aaKnown RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 MAP2K1Q02750 393 aaPredicted RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 ZNF385BQ569K4 471 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 USPL1Q5W0Q7 1092 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 FAM214BQ7L5A3 538 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 PTF1AQ7RTS3 328 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 TMC4Q7Z404 712 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 CCNJLQ8IV13 435 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.38□□□□□ -1.87
CALD1-216ENST00000473714 WDR89Q96FK6 387 aaPredicted RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 LIN7BQ9HAP6 207 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 PPP4R2Q9NY27 417 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 KDM2BQ8NHM5 1336 aa3.38□□□□□ -1.87
CALD1-216ENST00000473714 ZNF644Q9H582 1327 aaPredicted RBP3.38□□□□□ -1.87
CALD1-216ENST00000473714 A0A1W2PP55 124 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 GPR182O15218 404 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 TRIM13O60858 407 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 INSRRP14616 1297 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 CDK11BP21127 795 aaKnown RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 GNA15P30679 374 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 GTF2F1P35269 517 aaKnown RBP eCLIP3.37□□□□□ -1.87
CALD1-216ENST00000473714 DSC3Q14574 896 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 PUM1Q14671 1186 aaKnown RBP eCLIP3.37□□□□□ -1.87
CALD1-216ENST00000473714 ENOX2Q16206 610 aaKnown RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 SPATS1Q496A3 300 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 TMEM132EQ6IEE7 984 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 TTC6Q86TZ1 520 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 MYLIPQ8WY64 445 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 FRMD6Q96NE9 622 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 ALPK1Q96QP1 1244 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 ZC3H12CQ9C0D7 883 aaKnown RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 CCDC86Q9H6F5 360 aaKnown RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 ZFYVE28Q9HCC9 887 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 ATP13A1Q9HD20 1204 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 SLC52A1Q9NWF4 448 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 CFDP1Q9UEE9 299 aaPredicted RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 INPP5FQ9Y2H2 1132 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 LMTK2Q8IWU2 1503 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 COL14A1Q05707 1796 aaKnown RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 TUBGCP6Q96RT7 1819 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 A0A0C4DFX4 3053 aa3.37□□□□□ -1.87
CALD1-216ENST00000473714 EIF2AK4Q9P2K8 1649 aaKnown RBP3.37□□□□□ -1.87
CALD1-216ENST00000473714 PEAK1Q9H792 1746 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 OTOL1A6NHN0 477 aaPredicted RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 FAM155AB1AL88 458 aaPredicted RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 RFXAPO00287 272 aa3.36□□□□□ -1.87
CALD1-216ENST00000473714 EIF1AYO14602 144 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 CPNE3O75131 537 aaKnown RBP3.36□□□□□ -1.87
CALD1-216ENST00000473714 GADD45BO75293 160 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms