RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 DDX20Q9UHI6 824 aaKnown RBP7.6□□□□□ -1.19
HDAC1-205ENST00000472928 MYH8P13535 1937 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 RLFQ13129 1914 aa7.6□□□□□ -1.19
HDAC1-205ENST00000472928 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 TMEM265A0A087WTH1 108 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 A0A0D9SFI3 127 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 TRIM43BA6NCK2 446 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 GOLGA8CPA6NN73 597 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 DNM1LO00429 736 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 CNMDO75829 334 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 DEKP35659 375 aaKnown RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 ZAP70P43403 619 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 EPHB4P54760 987 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 PPP4CP60510 307 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 NMIQ13287 307 aaPredicted RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 GRIN2CQ14957 1233 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 SNX17Q15036 470 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 BLOC1S3Q6QNY0 202 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 CWC27Q6UX04 472 aaKnown RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 SH3RF1Q7Z6J0 888 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 DZIP1Q86YF9 867 aaKnown RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 ZGPATQ8N5A5 531 aaKnown RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 KBTBD3Q8NAB2 608 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 ADAMTS19Q8TE59 1207 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 RUFY2Q8WXA3 655 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 LPAR1Q92633 364 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 TRIM43Q96BQ3 446 aaPredicted RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 C22orf23Q9BZE7 217 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 IL25Q9H293 177 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 ANO2Q9NQ90 1003 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 PDLIM7Q9NR12 457 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 PRKAG2Q9UGJ0 569 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 TSR3Q9UJK0 312 aaKnown RBP7.59□□□□□ -1.19
HDAC1-205ENST00000472928 ATP11BQ9Y2G3 1177 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 SIPA1L1O43166 1804 aa7.59□□□□□ -1.19
HDAC1-205ENST00000472928 PDS5AQ29RF7 1337 aaKnown RBP7.58□□□□□ -1.2
HDAC1-205ENST00000472928 SGSM2O43147 1006 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 MECOMQ03112 1051 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 NR6A1Q15406 480 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 TRIM60Q495X7 471 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 MFSD14CQ5VZR4 134 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 BRICD5Q6PL45 260 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 LYPD8Q6UX82 237 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 SLC39A5Q6ZMH5 540 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 SPATA5Q8NB90 893 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 GTF3C2Q8WUA4 911 aaPredicted RBP7.58□□□□□ -1.2
HDAC1-205ENST00000472928 ZNF512BQ96KM6 892 aaPredicted RBP7.58□□□□□ -1.2
HDAC1-205ENST00000472928 FAM227BQ96M60 508 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 PAGR1Q9BTK6 254 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 ANTXR1Q9H6X2 564 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 DNAJC18Q9H819 358 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 AS3MTQ9HBK9 375 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 PRDM5Q9NQX1 630 aaPredicted RBP7.58□□□□□ -1.2
HDAC1-205ENST00000472928 ABCF2Q9UG63 623 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 BRWD1Q9NSI6 2320 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 MYH1P12882 1939 aa7.58□□□□□ -1.2
HDAC1-205ENST00000472928 CCDC171Q6TFL3 1326 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 MSCO60682 206 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 HOXC6P09630 235 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 CYBAP13498 195 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 MCCP23508 829 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 ITGB8P26012 769 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 CYP2C19P33261 490 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 VAC14Q08AM6 782 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 TTF1Q15361 905 aaPredicted RBP7.57□□□□□ -1.2
HDAC1-205ENST00000472928 LRRFIP1Q32MZ4 808 aaKnown RBP7.57□□□□□ -1.2
HDAC1-205ENST00000472928 GJC2Q5T442 439 aaPredicted RBP7.57□□□□□ -1.2
HDAC1-205ENST00000472928 NPLOC4Q8TAT6 608 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 WNT2BQ93097 391 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 FAM122AQ96E09 287 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 THAP11Q96EK4 314 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
HDAC1-205ENST00000472928 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.57□□□□□ -1.23e-8■■□□□ 13.2
HDAC1-205ENST00000472928 PIH1D3Q9NQM4 214 aaKnown RBP7.57□□□□□ -1.2
HDAC1-205ENST00000472928 TMOD4Q9NZQ9 345 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 HMG20BQ9P0W2 317 aa7.57□□□□□ -1.2
HDAC1-205ENST00000472928 HERC5Q9UII4 1024 aaKnown RBP7.57□□□□□ -1.2
HDAC1-205ENST00000472928 SLC15A5A6NIM6 579 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 C19orf81C9J6K1 198 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 IDH1O75874 414 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 GDF11O95390 407 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 CHGBP05060 677 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 CYP2E1P05181 493 aaPredicted RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 ASNSP08243 561 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 CNGA1P29973 690 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 RBM25P49756 843 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 TLE2Q04725 743 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 MAP3K12Q12852 859 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 GRB14Q14449 540 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 CCDC129Q6ZRS4 1044 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 ZNF589Q86UQ0 364 aaPredicted RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 CCAR1Q8IX12 1150 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
HDAC1-205ENST00000472928 NSUN4Q96CB9 384 aaKnown RBP7.56□□□□□ -1.2
HDAC1-205ENST00000472928 RNPC3Q96LT9 517 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms