RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 MBD4O95243 580 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 FAM157BP0CG42 384 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 POLD1P28340 1107 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 DDIT3P35638 169 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 SERPINB4P48594 390 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 NUCB2P80303 420 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 MECOMQ03112 1051 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 IER5Q5VY09 327 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 TREML1Q86YW5 311 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 IFNL3Q8IZI9 196 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 NCOA7Q8NI08 942 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 ATXN7L1Q9ULK2 861 aaPredicted RBP7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 SUGT1Q9Y2Z0 365 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 SLC4A4Q9Y6R1 1079 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 FAM205AQ6ZU69 1335 aa7.18□□□□□ -1.26
SMNDC1-204ENST00000471297 GSG1L2A8MUP6 293 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 OPLAHO14841 1288 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 ZBTB39O15060 712 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 FOXP2O15409 715 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 BAG3O95817 575 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 GMPRP36959 345 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 IDH3AP50213 366 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 TGFB2P61812 414 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 FKBP1AP62942 108 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 CTBSQ01459 385 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 EXOSC10Q01780 885 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 KCNA1Q09470 495 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 TRDNQ13061 729 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 MTMR3Q13615 1198 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 TTLL5Q6EMB2 1281 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 PODNQ7Z5L7 613 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 DZIP1Q86YF9 867 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 ETFBKMTQ8IXQ9 262 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 LCORLQ8N3X6 602 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 FBXL16Q8N461 479 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 TTLL6Q8N841 843 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 RIOK1Q9BRS2 568 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 NOL10Q9BSC4 688 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 RTFDC1Q9BY42 306 aaPredicted RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 CRNKL1Q9BZJ0 848 aaKnown RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 MTFR1LQ9H019 292 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 NAPBQ9H115 298 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 VPS33BQ9H267 617 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 ARMT1Q9H993 441 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 BRD7Q9NPI1 651 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 ATP8A2Q9NTI2 1148 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 MARK1Q9P0L2 795 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 HCN2Q9UL51 889 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 WDR19Q8NEZ3 1342 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 ANKRD31Q8N7Z5 1873 aa7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 COL1A1P02452 1464 aaPredicted RBP7.17□□□□□ -1.26
SMNDC1-204ENST00000471297 DOCK2Q92608 1830 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 EFSO43281 561 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 PCP11498 1178 aaKnown RBP7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 CPA1P15085 419 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 MX2P20592 715 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 FGFR3P22607 806 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 PRDX5P30044 214 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 CHRNA5P30532 468 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 MCM5P33992 734 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 TDO2P48775 406 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 NT5C2P49902 561 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 FGD1P98174 961 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 TYRO3Q06418 890 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 ZNF211Q13398 564 aaPredicted RBP7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 GAS6Q14393 721 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 RNFT1Q5M7Z0 435 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 SOGA3Q5TF21 947 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 Q6ZUG5 572 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 STOX1Q6ZVD7 989 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 RALYLQ86SE5 291 aaKnown RBP7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 RTKN2Q8IZC4 609 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 MIGA1Q8NAN2 632 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 CNTNAP3BQ96NU0 1288 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 GPR101Q96P66 508 aaPredicted RBP7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 MTA3Q9BTC8 594 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 AGXT2Q9BYV1 514 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 CNTNAP3Q9BZ76 1288 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 KRT23Q9C075 422 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 RNF41Q9H4P4 317 aaPredicted RBP7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 CNNM2Q9H8M5 875 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 GNEQ9Y223 722 aaKnown RBP7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 C10orf71Q711Q0 1435 aa7.16□□□□□ -1.26
SMNDC1-204ENST00000471297 LRRC37AA6NMS7 1700 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 MYH7P12883 1935 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 PRKAB2O43741 272 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 ICMTO60725 284 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 INPP5BP32019 993 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 HAND2P61296 217 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 DYNLL1P63167 89 aaKnown RBP7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 LAMC2Q13753 1193 aa7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 TOB2Q14106 344 aaPredicted RBP7.15□□□□□ -1.26
SMNDC1-204ENST00000471297 RAB3GAP1Q15042 981 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms