RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 SH2D4AQ9H788 454 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 HOMER2Q9NSB8 354 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 FAM207AQ9NSI2 230 aaPredicted RBP11.64□□□□□ -0.55
RRP1B-202ENST00000470886 SPATA31A3Q5VYP0 1347 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
RRP1B-202ENST00000470886 BCRP11274 1271 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 ALX1Q15699 326 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 MSANTD4Q8NCY6 345 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 PNMA1Q8ND90 353 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 VTI1AQ96AJ9 217 aa11.64□□□□□ -0.55
RRP1B-202ENST00000470886 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
RRP1B-202ENST00000470886 PUS3Q9BZE2 481 aaKnown RBP11.64□□□□□ -0.55
RRP1B-202ENST00000470886 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 IL6STP40189 918 aaPredicted RBP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 LONRF3Q496Y0 759 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 AMFRQ9UKV5 643 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 NWD1Q149M9 1564 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 CTIFO43310 598 aaKnown RBP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 MFAP3LO75121 409 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 PHKA1P46020 1223 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 CPSF2Q9P2I0 782 aaKnown RBP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 FAM184BQ9ULE4 1060 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 PCDHA4Q9UN74 947 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 EXOC7Q9UPT5 735 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 JRKLQ9Y4A0 524 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 ALS2CLQ60I27 953 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 INTS8Q75QN2 995 aaKnown RBP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 GSTA5Q7RTV2 222 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 P2RX5Q93086 422 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 STK17AQ9UEE5 414 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 SEPT2Q15019 361 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 DHX40Q8IX18 779 aaKnown RBP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 BCAS4Q8TDM0 211 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 MPHOSPH6Q99547 160 aaKnown RBP11.63□□□□□ -0.55
RRP1B-202ENST00000470886 GOLPH3LQ9H4A5 285 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 FAM204AQ9H8W3 233 aa11.63□□□□□ -0.55
RRP1B-202ENST00000470886 A0A087WUV0 522 aaPredicted RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 SPOPO43791 374 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 VIMP08670 466 aaKnown RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 ATP11AP98196 1134 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 IQCB1Q15051 598 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 CCDC144BQ3MJ40 725 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 C10orf76Q5T2E6 689 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 MB21D2Q8IYB1 491 aaPredicted RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 ACSBG1Q96GR2 724 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 ZNF512BQ96KM6 892 aaPredicted RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 CNOT6LQ96LI5 555 aaKnown RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 RUNDC3BQ96NL0 473 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 PUS7LQ9H0K6 701 aaKnown RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 GREM2Q9H772 168 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 RRP15Q9Y3B9 282 aaKnown RBP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 BTG4Q9NY30 223 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 DKC1O60832 514 aaKnown RBP eCLIP11.62□□□□□ -0.55
RRP1B-202ENST00000470886 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 KCNK9Q9NPC2 374 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 SH3GLB2Q9NR46 395 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 AK9Q5TCS8 1911 aa11.62□□□□□ -0.55
RRP1B-202ENST00000470886 SEC31AO94979 1220 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 NDUFA10O95299 355 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 CCNE1P24864 410 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 STAT1P42224 750 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 RPS8P62241 208 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 KRT71Q3SY84 523 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 DYMQ7RTS9 669 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 KLHL7Q8IXQ5 586 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 SLFN12Q8IYM2 578 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 LSM14BQ9BX40 385 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 TMEM110-MUSTN1A8MSY1 372 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 PSMD2Q13200 908 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 CC2D1AQ6P1N0 951 aaPredicted RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 DAAM2Q86T65 1068 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 KCNG1Q9UIX4 513 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 ABCC6O95255 1503 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 E7EVH7 732 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 XRCC5P13010 732 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 ATP1A3P13637 1013 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 CTNNA1P35221 906 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 GLE1Q53GS7 698 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 DENND2CQ68D51 928 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 CACNA2D3Q8IZS8 1091 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 IWS1Q96ST2 819 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 KCNF1Q9H3M0 494 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 SAMSN1Q9NSI8 373 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 CPDO75976 1380 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 RNF40O75150 1001 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 LIN9Q5TKA1 542 aa11.61□□□□□ -0.55
RRP1B-202ENST00000470886 RBM43Q6ZSC3 357 aaKnown RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 ELOA2Q8IYF1 753 aaPredicted RBP11.61□□□□□ -0.55
RRP1B-202ENST00000470886 PPP1R14CQ8TAE6 165 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms