RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 MKL1Q969V6 931 aa13.68□□□□□ -0.22
FAM228B-203ENST00000469867 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
FAM228B-203ENST00000469867 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
FAM228B-203ENST00000469867 HOMER2Q9NSB8 354 aa13.68□□□□□ -0.22
FAM228B-203ENST00000469867 ATP11BQ9Y2G3 1177 aa13.68□□□□□ -0.22
FAM228B-203ENST00000469867 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
FAM228B-203ENST00000469867 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 RRP9O43818 475 aaKnown RBP13.67□□□□□ -0.22
FAM228B-203ENST00000469867 PGK1P00558 417 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 LRRC41Q15345 812 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 RASGRP2Q7LDG7 609 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 FAM227BQ96M60 508 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 MTMR7Q9Y216 660 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 TSPY2A6NKD2 308 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 ADCYAP1R1P41586 468 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 SLFN13Q68D06 897 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 ARID3AQ99856 593 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 XPNPEP3Q9NQH7 507 aa13.67□□□□□ -0.22
FAM228B-203ENST00000469867 ESPNB1AK53 854 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 TMEM232C9JQI7 657 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 ZBED4O75132 1171 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 RARBP10826 455 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 BMP3P12645 472 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 MCCP23508 829 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 RTP1P59025 263 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
FAM228B-203ENST00000469867 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 A0A0D9SFI3 127 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 RANBP6O60518 1105 aaKnown RBP13.66□□□□□ -0.22
FAM228B-203ENST00000469867 COPB2P35606 906 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 SLC1A4P43007 532 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 ANKRD35Q8N283 1001 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 ESYT1Q9BSJ8 1104 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 IL17RBQ9NRM6 502 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 DIS3Q9Y2L1 958 aaKnown RBP13.66□□□□□ -0.22
FAM228B-203ENST00000469867 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
FAM228B-203ENST00000469867 PLIN4Q96Q06 1357 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 MCM3APO60318 1980 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 STAT2P52630 851 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 RBM10P98175 930 aaKnown RBP13.65□□□□□ -0.22
FAM228B-203ENST00000469867 SLC39A5Q6ZMH5 540 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
FAM228B-203ENST00000469867 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 PRKAG2Q9UGJ0 569 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 ATP2A1O14983 1001 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 ZNF865P0CJ78 1059 aaPredicted RBP13.65□□□□□ -0.22
FAM228B-203ENST00000469867 TRIM60Q495X7 471 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 Q7L0L9 218 aa13.65□□□□□ -0.22
FAM228B-203ENST00000469867 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
FAM228B-203ENST00000469867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
FAM228B-203ENST00000469867 DNAJC25-GNG10A0A024R161 153 aa13.64□□□□□ -0.23
FAM228B-203ENST00000469867 ZHX1Q9UKY1 873 aaPredicted RBP13.64□□□□□ -0.23
FAM228B-203ENST00000469867 SNAI1O95863 264 aaPredicted RBP13.64□□□□□ -0.23
FAM228B-203ENST00000469867 FGAP02671 866 aa13.64□□□□□ -0.23
FAM228B-203ENST00000469867 AKR1A1P14550 325 aa13.64□□□□□ -0.23
FAM228B-203ENST00000469867 SNAP25P60880 206 aa13.64□□□□□ -0.23
FAM228B-203ENST00000469867 RRP12Q5JTH9 1297 aaKnown RBP13.64□□□□□ -0.23
FAM228B-203ENST00000469867 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
FAM228B-203ENST00000469867 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
FAM228B-203ENST00000469867 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
FAM228B-203ENST00000469867 SYNPO2Q9UMS6 1093 aa13.64□□□□□ -0.23
FAM228B-203ENST00000469867 HAND2P61296 217 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 LRIT3Q3SXY7 679 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 RNF180Q86T96 592 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 DEFB123Q8N688 67 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 ANO2Q9NQ90 1003 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
FAM228B-203ENST00000469867 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
FAM228B-203ENST00000469867 CNTN2Q02246 1040 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 NMIQ13287 307 aaPredicted RBP13.62□□□□□ -0.23
FAM228B-203ENST00000469867 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 DDX49Q9Y6V7 483 aaKnown RBP13.62□□□□□ -0.23
FAM228B-203ENST00000469867 ZNF536O15090 1300 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 SYNGAP1Q96PV0 1343 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 ADCY6O43306 1168 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 HSPD1P10809 573 aaKnown RBP13.62□□□□□ -0.23
FAM228B-203ENST00000469867 TLE2Q04725 743 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 CCDC174Q6PII3 467 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 CHURC1Q8WUH1 139 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 FGD4Q96M96 766 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 ANAPC4Q9UJX5 808 aa13.62□□□□□ -0.23
FAM228B-203ENST00000469867 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 A0A1W2PQ45 241 aaPredicted RBP13.61□□□□□ -0.23
FAM228B-203ENST00000469867 A0A1W2PQY0 241 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 OAZ1P54368 228 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 MAMDC4Q6UXC1 1216 aa13.61□□□□□ -0.23
FAM228B-203ENST00000469867 CCDC144CPQ8IYA2 1237 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms