RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
SNU13-206ENST00000469028 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
SNU13-206ENST00000469028 CPA1P15085 419 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 COPB2P35606 906 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 KRT32Q14532 448 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 GRM4Q14833 912 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 NBPF11Q86T75 865 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 ABRAQ8N0Z2 381 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 MMP19Q99542 508 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
SNU13-206ENST00000469028 PALM3A6NDB9 673 aaPredicted RBP12.84□□□□□ -0.35
SNU13-206ENST00000469028 IGHA2P01877 340 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 HMGCRP04035 888 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 ICAM1P05362 532 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 PGK2P07205 417 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 FCER1AP12319 257 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 LIFRP42702 1097 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNU13-206ENST00000469028 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
SNU13-206ENST00000469028 ADGRF4Q8IZF3 695 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
SNU13-206ENST00000469028 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 WDR19Q8NEZ3 1342 aa12.84□□□□□ -0.35
SNU13-206ENST00000469028 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 DDAH1O94760 285 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 SEC24BO95487 1268 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 ALAS1P13196 640 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 KCTD2Q14681 263 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.36
SNU13-206ENST00000469028 MUM1L1Q5H9M0 696 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 CHST13Q8NET6 341 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 UNC93B1Q9H1C4 597 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 JMJD4Q9H9V9 463 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 BIN2Q9UBW5 565 aaPredicted RBP12.83□□□□□ -0.36
SNU13-206ENST00000469028 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 RBBP6Q7Z6E9 1792 aaKnown RBP12.83□□□□□ -0.36
SNU13-206ENST00000469028 SMCHD1A6NHR9 2005 aa12.83□□□□□ -0.36
SNU13-206ENST00000469028 DNAJC25-GNG10A0A024R161 153 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 CCDC69A6NI79 296 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 CYTH3O43739 400 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 CCL5P13501 91 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 RXRAP19793 462 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 UBXN2AP68543 259 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 C8orf34Q49A92 452 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 MAP3K21Q5TCX8 1036 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 NFXL1Q6ZNB6 911 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 SGMS1Q86VZ5 419 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 MTMR8Q96EF0 704 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 FGD4Q96M96 766 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 ACAD9Q9H845 621 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 VAT1LQ9HCJ6 419 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
SNU13-206ENST00000469028 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 BRPF3Q9ULD4 1205 aa12.82□□□□□ -0.36
SNU13-206ENST00000469028 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
SNU13-206ENST00000469028 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
SNU13-206ENST00000469028 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 CYP2C19P33261 490 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 CACNB2Q08289 660 aaPredicted RBP12.81□□□□□ -0.36
SNU13-206ENST00000469028 QRICH1Q2TAL8 776 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 OLFML2BQ68BL8 750 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
SNU13-206ENST00000469028 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 CLEC4DQ8WXI8 215 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 RIOX1Q9H6W3 641 aa12.81□□□□□ -0.36
SNU13-206ENST00000469028 ZNFX1Q9P2E3 1918 aaKnown RBP12.81□□□□□ -0.36
SNU13-206ENST00000469028 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 NFIBO00712 420 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 DHX16O60231 1041 aaKnown RBP12.8□□□□□ -0.36
SNU13-206ENST00000469028 PPP1R11O60927 126 aaPredicted RBP12.8□□□□□ -0.36
SNU13-206ENST00000469028 PLEKHA8P1O95397 391 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
SNU13-206ENST00000469028 APOA5Q6Q788 366 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 Q6ZUG5 572 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 ANKRD35Q8N283 1001 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 TRPV1Q8NER1 839 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
SNU13-206ENST00000469028 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 DDX11Q96FC9 970 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNU13-206ENST00000469028 RNF208Q9H0X6 261 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
SNU13-206ENST00000469028 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
SNU13-206ENST00000469028 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms