RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 IGHA2P01877 340 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 HMGCRP04035 888 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 PSMA5P28066 241 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 GRM4Q14833 912 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 AGBL1Q96MI9 1066 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 TMEM106CQ9BVX2 250 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 UBA5Q9GZZ9 404 aa23.36■■□□□ 1.33
NPHP4-206ENST00000468253 KLRF2D3W0D1 207 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 COBLO75128 1261 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 DDAH1O94760 285 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 COL9A3Q14050 684 aaPredicted RBP23.35■■□□□ 1.33
NPHP4-206ENST00000468253 OLFML2BQ68BL8 750 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 ADGRF4Q8IZF3 695 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 FBXL16Q8N461 479 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 MAF1Q9H063 256 aa23.35■■□□□ 1.33
NPHP4-206ENST00000468253 MGAMO43451 1857 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 A0A0G2JMZ2 1700 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 CCDC69A6NI79 296 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 INHAP05111 366 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 CALM1P0DP23 149 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 CALM2P0DP24 149 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 CALM3P0DP25 149 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 SMARCA1P28370 1054 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 CCDC174Q6PII3 467 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 STAG2Q8N3U4 1231 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 TRIB2Q92519 343 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 TRERF1Q96PN7 1200 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 ACAD9Q9H845 621 aa23.34■■□□□ 1.33
NPHP4-206ENST00000468253 GPHNQ9NQX3 736 aaPredicted RBP23.34■■□□□ 1.33
NPHP4-206ENST00000468253 DNAJC25-GNG10A0A024R161 153 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 KIF5BP33176 963 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 SNAP25P60880 206 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 ZNF792Q3KQV3 632 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 MAP3K21Q5TCX8 1036 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 MFSD14CQ5VZR4 134 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 NFXL1Q6ZNB6 911 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 ZNF654Q8IZM8 581 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 NPLOC4Q8TAT6 608 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 DDX11Q96FC9 970 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 LZTS2Q9BRK4 669 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 TM6SF1Q9BZW5 370 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 JMJD4Q9H9V9 463 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 CCPG1Q9ULG6 757 aa23.33■■□□□ 1.33
NPHP4-206ENST00000468253 ZSWIM8A7E2V4 1837 aa23.33■■□□□ 1.32
NPHP4-206ENST00000468253 SLC4A3P48751 1232 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 RGS19P49795 217 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 GNAQP50148 359 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 BLOC1S2Q6QNY1 142 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 ANKRD35Q8N283 1001 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 MSL3Q8N5Y2 521 aaKnown RBP23.32■■□□□ 1.32
NPHP4-206ENST00000468253 MTMR8Q96EF0 704 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 JAKMIP1Q96N16 626 aaKnown RBP23.32■■□□□ 1.32
NPHP4-206ENST00000468253 RIOX1Q9H6W3 641 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 RNF146Q9NTX7 359 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 SLC12A7Q9Y666 1083 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 RPTORQ8N122 1335 aa23.32■■□□□ 1.32
NPHP4-206ENST00000468253 PARP14Q460N5 1801 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 GJB1P08034 283 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 ALAS1P13196 640 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 CCL5P13501 91 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 MTFR1Q15390 333 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 CCL14Q16627 93 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 SYNE3Q6ZMZ3 975 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 RGS22Q8NE09 1264 aa23.31■■□□□ 1.32
NPHP4-206ENST00000468253 ANAPC15P60006 121 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 TRAF1Q13077 416 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 ZNF467Q7Z7K2 595 aaPredicted RBP23.3■■□□□ 1.32
NPHP4-206ENST00000468253 CTCFLQ8NI51 663 aaPredicted RBP23.3■■□□□ 1.32
NPHP4-206ENST00000468253 MAML3Q96JK9 1138 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 LRRC2Q9BYS8 371 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 RNF208Q9H0X6 261 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 CPVLQ9H3G5 476 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 ZSWIM6Q9HCJ5 1215 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 HMX1Q9NP08 348 aaPredicted RBP23.3■■□□□ 1.32
NPHP4-206ENST00000468253 FLRT1Q9NZU1 646 aa23.3■■□□□ 1.32
NPHP4-206ENST00000468253 RPS6KB1P23443 525 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 RCAN1P53805 252 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 CACNB2Q08289 660 aaPredicted RBP23.29■■□□□ 1.32
NPHP4-206ENST00000468253 CDC37Q16543 378 aaPredicted RBP23.29■■□□□ 1.32
NPHP4-206ENST00000468253 FANCBQ8NB91 859 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 VAT1LQ9HCJ6 419 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 PAK6Q9NQU5 681 aaPredicted RBP23.29■■□□□ 1.32
NPHP4-206ENST00000468253 HOMER2Q9NSB8 354 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 NRBP1Q9UHY1 535 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 PFASO15067 1338 aa23.29■■□□□ 1.32
NPHP4-206ENST00000468253 CAPN15O75808 1086 aa23.28■■□□□ 1.32
NPHP4-206ENST00000468253 PGK2P07205 417 aa23.28■■□□□ 1.32
NPHP4-206ENST00000468253 PPP2R5BQ15173 497 aa23.28■■□□□ 1.32
NPHP4-206ENST00000468253 IL17RAQ96F46 866 aa23.28■■□□□ 1.32
NPHP4-206ENST00000468253 AGXT2Q9BYV1 514 aa23.28■■□□□ 1.32
NPHP4-206ENST00000468253 UNC93B1Q9H1C4 597 aa23.28■■□□□ 1.32
NPHP4-206ENST00000468253 A1CFQ9NQ94 594 aaKnown RBP23.28■■□□□ 1.32
NPHP4-206ENST00000468253 KIAA0100Q14667 2235 aaKnown RBP23.28■■□□□ 1.32
NPHP4-206ENST00000468253 ZBTB5O15062 677 aa23.27■■□□□ 1.32
NPHP4-206ENST00000468253 DHX16O60231 1041 aaKnown RBP23.27■■□□□ 1.32
NPHP4-206ENST00000468253 PRKAR2AP13861 404 aaKnown RBP23.27■■□□□ 1.32
NPHP4-206ENST00000468253 TRIM32Q13049 653 aa23.27■■□□□ 1.32
NPHP4-206ENST00000468253 QRICH1Q2TAL8 776 aa23.27■■□□□ 1.32
NPHP4-206ENST00000468253 MUM1L1Q5H9M0 696 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms