RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 FBXO40Q9UH90 709 aa17.81■□□□□ 0.44
ATG4B-215ENST00000468018 MTMR7Q9Y216 660 aa17.81■□□□□ 0.44
ATG4B-215ENST00000468018 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
ATG4B-215ENST00000468018 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-215ENST00000468018 E7EWF7 191 aa17.8■□□□□ 0.44
ATG4B-215ENST00000468018 SYDE2Q5VT97 1194 aa17.8■□□□□ 0.44
ATG4B-215ENST00000468018 ERICH6BQ5W0A0 696 aa17.8■□□□□ 0.44
ATG4B-215ENST00000468018 MAMDC4Q6UXC1 1216 aa17.8■□□□□ 0.44
ATG4B-215ENST00000468018 MSL3Q8N5Y2 521 aaKnown RBP17.8■□□□□ 0.44
ATG4B-215ENST00000468018 AGBL1Q96MI9 1066 aa17.8■□□□□ 0.44
ATG4B-215ENST00000468018 NRBP1Q9UHY1 535 aa17.8■□□□□ 0.44
ATG4B-215ENST00000468018 TFRCP02786 760 aaKnown RBP17.79■□□□□ 0.44
ATG4B-215ENST00000468018 ICAM1P05362 532 aa17.79■□□□□ 0.44
ATG4B-215ENST00000468018 SLC16A2P36021 539 aa17.79■□□□□ 0.44
ATG4B-215ENST00000468018 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-215ENST00000468018 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
ATG4B-215ENST00000468018 GPATCH4Q5T3I0 446 aaKnown RBP17.79■□□□□ 0.44
ATG4B-215ENST00000468018 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-215ENST00000468018 MB21D2Q8IYB1 491 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-215ENST00000468018 TINF2Q9BSI4 451 aa17.79■□□□□ 0.44
ATG4B-215ENST00000468018 ACAD9Q9H845 621 aa17.79■□□□□ 0.44
ATG4B-215ENST00000468018 CTDP1Q9Y5B0 961 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-215ENST00000468018 MSCO60682 206 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 NEFLP07196 543 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 SNAP25P60880 206 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 TRDNQ13061 729 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 PRPF38BQ5VTL8 546 aaKnown RBP17.78■□□□□ 0.44
ATG4B-215ENST00000468018 NCOA7Q8NI08 942 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 DIS3LQ8TF46 1054 aaKnown RBP17.78■□□□□ 0.44
ATG4B-215ENST00000468018 UBAC1Q9BSL1 405 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 A1CFQ9NQ94 594 aaKnown RBP17.78■□□□□ 0.44
ATG4B-215ENST00000468018 RNF146Q9NTX7 359 aa17.78■□□□□ 0.44
ATG4B-215ENST00000468018 DDX20Q9UHI6 824 aaKnown RBP17.78■□□□□ 0.44
ATG4B-215ENST00000468018 ISY1Q9ULR0 285 aaKnown RBP17.78■□□□□ 0.44
ATG4B-215ENST00000468018 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
ATG4B-215ENST00000468018 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 SEPT4O43236 478 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 ANTXR2P58335 489 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 FAM133AQ8N9E0 248 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 TRERF1Q96PN7 1200 aa17.77■□□□□ 0.44
ATG4B-215ENST00000468018 CEP290O15078 2479 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 SLC27A2O14975 620 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 CDC45O75419 566 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 ZNF865P0CJ78 1059 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-215ENST00000468018 GOLGA8HP0CJ92 632 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 COL6A1P12109 1028 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 ASPRV1Q53RT3 343 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 MUM1L1Q5H9M0 696 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 IFIT1BQ5T764 474 aaKnown RBP17.76■□□□□ 0.43
ATG4B-215ENST00000468018 KIAA1211Q6ZU35 1233 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 ANKRD35Q8N283 1001 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 DDX11Q96FC9 970 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 PAWRQ96IZ0 340 aaKnown RBP17.76■□□□□ 0.43
ATG4B-215ENST00000468018 MTA3Q9BTC8 594 aa17.76■□□□□ 0.43
ATG4B-215ENST00000468018 SNAI1O95863 264 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-215ENST00000468018 ALAS1P13196 640 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 TAL1P17542 331 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-215ENST00000468018 PRAMEF19Q5SWL8 479 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 NECAB2Q7Z6G3 386 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 SENP2Q9HC62 589 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 HOMER2Q9NSB8 354 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 CCPG1Q9ULG6 757 aa17.75■□□□□ 0.43
ATG4B-215ENST00000468018 ASTN1O14525 1302 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 PFASO15067 1338 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-215ENST00000468018 CREB3L3Q68CJ9 461 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 RALYLQ86SE5 291 aaKnown RBP17.74■□□□□ 0.43
ATG4B-215ENST00000468018 CLEC4DQ8WXI8 215 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 HTATIP2Q9BUP3 242 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 KATNBL1Q9H079 304 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 CYP39A1Q9NYL5 469 aa17.74■□□□□ 0.43
ATG4B-215ENST00000468018 PALM3A6NDB9 673 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-215ENST00000468018 PARP1P09874 1014 aaKnown RBP17.73■□□□□ 0.43
ATG4B-215ENST00000468018 CNGA1P29973 690 aa17.73■□□□□ 0.43
ATG4B-215ENST00000468018 TROAPQ12815 778 aa17.73■□□□□ 0.43
ATG4B-215ENST00000468018 MTMR8Q96EF0 704 aa17.73■□□□□ 0.43
ATG4B-215ENST00000468018 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
ATG4B-215ENST00000468018 PPP4R2Q9NY27 417 aa17.73■□□□□ 0.43
ATG4B-215ENST00000468018 MAD2L2Q9UI95 211 aa17.73■□□□□ 0.43
ATG4B-215ENST00000468018 SOWAHBA6NEL2 793 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 NFIBO00712 420 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
ATG4B-215ENST00000468018 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-215ENST00000468018 CNTN2Q02246 1040 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 TSGA10IPQ3SY00 556 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 ARMCX2Q7L311 632 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 CHST3Q7LGC8 479 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 ADGRF4Q8IZF3 695 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 C11orf49Q9H6J7 331 aa17.72■□□□□ 0.43
ATG4B-215ENST00000468018 POTEB2H3BUK9 544 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms