RNA–Protein interactions for RNA: ENST00000466846.5

PAXBP1-207, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 3,879 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-207ENST00000466846 TMTC2Q8N394 836 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 CCDC82Q8N4S0 544 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 SLC44A5Q8NCS7 719 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 ZKSCAN3Q9BRR0 538 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 MXD3Q9BW11 206 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 KRTAP3-3Q9BYR6 98 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 ZMYND12Q9H0C1 365 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 DEFB129Q9H1M3 183 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 TMX1Q9H3N1 280 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 TSPY26PQ9H489 355 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 RNF41Q9H4P4 317 aaPredicted RBP4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 CBX8Q9HC52 389 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 GNL3LQ9NVN8 582 aaKnown RBP4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 TFIP11Q9UBB9 837 aaKnown RBP4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 GGA1Q9UJY5 639 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 SYNPO2Q9UMS6 1093 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 PCDHB6Q9Y5E3 794 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 SRPRBQ9Y5M8 271 aaKnown RBP4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 BPTFQ12830 3046 aa4.03□□□□□ -1.76
PAXBP1-207ENST00000466846 FRMPD4Q14CM0 1322 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 LTBP3Q9NS15 1303 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 ESYT2A0FGR8 921 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 MMP10P09238 476 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 BTDP43251 543 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 NR5A1Q13285 461 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 ARID5BQ14865 1188 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 SPATA32Q96LK8 384 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 USB1Q9BQ65 265 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 OSBPL5Q9H0X9 879 aaPredicted RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 VPS33BQ9H267 617 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 RBM28Q9NW13 759 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 EGFL7Q9UHF1 273 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 VPS37CA5D8V6 355 aaPredicted RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 BTBD18B2RXH4 712 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 FANCGO15287 622 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 UFL1O94874 794 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CDK8P49336 464 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 TBX2Q13207 712 aaPredicted RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CUL4BQ13620 913 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 WTAPQ15007 396 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 GORABQ5T7V8 394 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 STRIP1Q5VSL9 837 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 SPTY2D1Q68D10 685 aaPredicted RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 WWC2Q6AWC2 1192 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 RAB11FIP4Q86YS3 637 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CMTR1Q8N1G2 835 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 FAM160A2Q8N612 972 aaPredicted RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 KCNG4Q8TDN1 519 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 TBC1D22AQ8WUA7 517 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 ESR2Q92731 530 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 LRCH3Q96II8 777 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 TMEM47Q9BQJ4 181 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 ALG1Q9BT22 464 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 BARHL2Q9NY43 387 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 LRP2BPQ9P2M1 347 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CFAP45Q9UL16 551 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 COL4A4P53420 1690 aaPredicted RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 RALGAPA2Q2PPJ7 1873 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 LDHBP07195 334 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CFHP08603 1231 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 VIL1P09327 827 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 PDHBP11177 359 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 PDE4BQ07343 736 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 NFIAQ12857 509 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 MORC3Q14149 939 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 SF3A1Q15459 793 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 RTN1Q16799 776 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 COBLL1Q53SF7 1204 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 USP49Q70CQ1 688 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 C8orf76Q96K31 380 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 MTMR9Q96QG7 549 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 UCN2Q96RP3 112 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 MMTAG2Q9BU76 263 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CRNKL1Q9BZJ0 848 aaKnown RBP4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 BCL11AQ9H165 835 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 MTMR4Q9NYA4 1195 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 PCDHA6Q9UN73 950 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 PCDHA8Q9Y5H6 950 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 TRPM7Q96QT4 1865 aa4.02□□□□□ -1.77
PAXBP1-207ENST00000466846 CENPFP49454 3210 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 USP17L3A6NCW0 530 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 USP17L4A6NCW7 530 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 FAM196BA6NMK8 535 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 GOLGA8AA7E2F4 631 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 FOXN1O15353 648 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 KLRC4O43908 158 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 DHX16O60231 1041 aaKnown RBP4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 CALM1P0DP23 149 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 CALM2P0DP24 149 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 CALM3P0DP25 149 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 SLURP2P0DP57 97 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 RXRBP28702 533 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 PDE6BP35913 854 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 DPYDQ12882 1025 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 KIAA1755Q5JYT7 1200 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 USP17L1Q7RTZ2 530 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 MICU3Q86XE3 530 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 FAM200AQ8TCP9 573 aa4.01□□□□□ -1.77
PAXBP1-207ENST00000466846 TEPSINQ96N21 525 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms