RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 SYT9Q86SS6 491 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 ARHGEF25Q86VW2 580 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 REXO1Q8N1G1 1221 aaKnown RBP4.25□□□□□ -1.73
SORT1-202ENST00000466471 CMTR1Q8N1G2 835 aaKnown RBP4.25□□□□□ -1.73
SORT1-202ENST00000466471 RBBP8NLQ8NC74 664 aaPredicted RBP4.25□□□□□ -1.73
SORT1-202ENST00000466471 SH3TC2Q8TF17 1288 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 CFAP54Q96N23 3096 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 EHD4Q9H223 541 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 RRAGDQ9NQL2 400 aaPredicted RBP4.25□□□□□ -1.73
SORT1-202ENST00000466471 TMEM63CQ9P1W3 806 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 KLHL42Q9P2K6 505 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 PLAAQ9Y263 795 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 SUGT1Q9Y2Z0 365 aa4.25□□□□□ -1.73
SORT1-202ENST00000466471 ANKRD11Q6UB99 2663 aaPredicted RBP4.25□□□□□ -1.73
SORT1-202ENST00000466471 ACEP12821 1306 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 ELOA3CA0A087WX78 387 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 TMEM238LA0A1B0GVL6 79 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 ELOA3DA6NLF2 546 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 PDPK1O15530 556 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 EFSO43281 561 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 XYLBO75191 536 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 TPM2P07951 284 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 HOXD8P13378 290 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 ALAS2P22557 587 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 CHRNA5P30532 468 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 SOX18P35713 384 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 GIPRP48546 466 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 CHMP4BP1P59074 171 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 TYRO3Q06418 890 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 APOBRQ0VD83 1088 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 RSPO4Q2I0M5 234 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 PLEKHG6Q3KR16 790 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 ELOA3BQ3SY89 546 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 FOXD4L6Q3SYB3 417 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 HS1BP3Q53T59 392 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 ZC3H12BQ5HYM0 836 aaKnown RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 AKAP4Q5JQC9 854 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 TTC39BQ5VTQ0 682 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 FBXL19Q6PCT2 694 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 FOXD4L3Q6VB84 417 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 AGMOQ6ZNB7 445 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 CLEC17AQ6ZS10 378 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 C16orf86Q6ZW13 317 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 PNMA8AQ86V59 439 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 TRIM42Q8IWZ5 723 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 RPUSD2Q8IZ73 545 aaKnown RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 ELOA3Q8NG57 546 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 NKD1Q969G9 470 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 SYTL4Q96C24 671 aaPredicted RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 SHDQ96IW2 340 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 PDCL3Q9H2J4 239 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 MYH16Q9H6N6 1097 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 ABCB6Q9NP58 842 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 TPSG1Q9NRR2 321 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 FANCLQ9NW38 375 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 DDX56Q9NY93 547 aaKnown RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 LAS1LQ9Y4W2 734 aaKnown RBP4.24□□□□□ -1.73
SORT1-202ENST00000466471 CACNA1SQ13698 1873 aa4.24□□□□□ -1.73
SORT1-202ENST00000466471 CHD6Q8TD26 2715 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 MAPK8IP3Q9UPT6 1336 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 ZFHX4Q86UP3 3567 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 A0A1W2PP55 124 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 SCO2A0A1W2PP80 73 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 M0R082 166 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 FRAT2O75474 233 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 KIF4AO95239 1232 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 PARNO95453 639 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 S100BP04271 92 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 XRCC6P12956 609 aaKnown RBP eCLIP4.23□□□□□ -1.73
SORT1-202ENST00000466471 ITPKAP23677 461 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 EPHX2P34913 555 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 DDIT3P35638 169 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 ZNF165P49910 485 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 MRE11P49959 708 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 CASP7P55210 303 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 CALD1Q05682 793 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 MAP3K12Q12852 859 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 SFSWAPQ12872 951 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 CAMK2GQ13555 558 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 LAMC2Q13753 1193 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 MPP2Q14168 576 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 FXNQ16595 210 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 DDR2Q16832 855 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 LONRF2Q1L5Z9 754 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 C2orf27AQ580R0 203 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 PRRT3Q5FWE3 981 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 DTHD1Q6ZMT9 781 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 C8orf86Q6ZUL3 223 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 KRT26Q7Z3Y9 468 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 CERS3Q8IU89 383 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 CCAR1Q8IX12 1150 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 C1orf127Q8N9H9 656 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 C19orf47Q8N9M1 422 aaKnown RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 ST13P5Q8NFI4 369 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 ZNF417Q8TAU3 575 aa4.23□□□□□ -1.73
SORT1-202ENST00000466471 THAP3Q8WTV1 239 aaPredicted RBP4.23□□□□□ -1.73
SORT1-202ENST00000466471 HNRNPLLQ8WVV9 542 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms